name:                BCMtools
version:             0.1.1
x-revision: 1
synopsis:            Big Contact Map Tools
description:         Tools for working with Big Contact Map generated by HiC experiments
license:             MIT
license-file:        LICENSE
author:              Kai Zhang
maintainer:          kai@kzhang.org
copyright:           (c) 2015 Kai Zhang
category:            Bioinformatics
build-type:          Simple
-- extra-source-files:  
cabal-version:       >=1.10

library
  exposed-modules:     
    BCM
    BCM.Visualize
    BCM.DiskMatrix
    BCM.IOMatrix
    BCM.Binary

  other-modules:       
    BCM.Visualize.Internal
    BCM.Visualize.Internal.Types

  build-depends:
      base >=4.7 && <5.0
    , bytestring >=0.10.0
    , cereal
    , conduit
    , conduit-extra
    , colour
    , data-default-class
    , unordered-containers
    , transformers
    , vector
    , zlib
    , matrices >=0.4.1 && <0.5

  hs-source-dirs:      src
  default-language:    Haskell2010

executable bcmtools
  hs-source-dirs:   exe
  main-is: Main.hs

  other-modules:
    BCMtools.Types
    BCMtools.Convert
    BCMtools.View

  build-depends:
      base >=4.7 && <5.0
    , BCMtools
    , cereal
    , optparse-applicative
    , conduit
    , conduit-extra
    , resourcet
    , bytestring-lexing
    , bytestring >=0.10.0
    , unordered-containers
    , split
    , data-default-class

  default-language:    Haskell2010

source-repository  head
  type: git
  location: https://github.com/kaizhang/BCMtools.git