name:                BiobaseHTTPTools
version:             1.0.0
synopsis:            Tools to query Bioinformatics HTTP services e.g. Entrez, Ensembl.
description:         BiobaseHTTP provides tools to interface the Bioinformatics REST services, currently Entrez, Ensembl.
                     .
                     Usage instructions can be found in the <https://github.com/eggzilla/BiobaseHTTPTools README>
                     .
                     Currently following Tools are included:
                     .
                     * FetchSequences:
                     Retrieves sequence in fasta format
                     .
                     * AccessionToTaxId:
                     Converts NCBI accession number to taxonomy id
                     .
                     * GeneIdToGOTerms:
                     Retrieve GOterms for a Ensembl GeneId
                     .
                     * GeneIdToUniProtId
                     Retrieves UniProtId for a Ensembl GeneId

license:             GPL-3
license-file:        LICENSE
author:              Florian Eggenhofer
maintainer:          egg@informatik.uni-freiburg.de
-- copyright:
category:            Bioinformatics
build-type:          Simple
cabal-version:       >=1.8
Tested-With: GHC == 8.4.3

source-repository head
  type:     git
  location: https://github.com/eggzilla/BiobaseHTTPTools

source-repository this
  type:     git
  location: https://github.com/eggzilla/BiobaseHTTPTools/tree/1.1.0
  tag:      1.1.0

executable FetchSequence
  Hs-Source-Dirs:      ./Biobase/
  main-is:	       FetchSequence.hs
  ghc-options:         -Wall -O2
  build-depends:       base >=4.5 && <5, cmdargs, BiobaseHTTP>=1.1.0, either-unwrap, BiobaseFasta >=0.2.0.0, bytestring, containers

executable AccessionToTaxId
  Hs-Source-Dirs:      ./Biobase/
  main-is:	       AccessionToTaxId.hs
  ghc-options:         -Wall -O2
  build-depends:       base >=4.5 && <5, cmdargs, BiobaseHTTP>=1.1.0, either-unwrap, bytestring, containers, hxt

executable GeneIdToUniProtId
  Hs-Source-Dirs:      ./Biobase/
  main-is:	           GeneIdToUniProtId.hs
  ghc-options:         -Wall -O2
  build-depends:       base >=4.5 && <5, cmdargs, BiobaseHTTP>=1.1.0, text

executable GeneIdToGOTerms
  Hs-Source-Dirs:      ./Biobase/
  main-is:	           GeneIdToGOTerms.hs
  ghc-options:         -Wall -O2
  build-depends:       base >=4.5 && <5, cmdargs, BiobaseHTTP>=1.1.0, text