name:           BiobaseVienna
version:        0.2.2.4
author:         Christian Hoener zu Siederdissen
maintainer:     choener@tbi.univie.ac.at
homepage:       http://www.tbi.univie.ac.at/~choener/
copyright:      Christian Hoener zu Siederdissen, 2010-2012
category:       Bioinformatics
synopsis:       Import Vienna energy parameters
license:        GPL-3
license-file:   LICENSE
build-type:     Simple
stability:      experimental
cabal-version:  >= 1.6.0
description:
                Importer and Exporter for Vienna energy files. Allows
                converting Turner parameter files to Vienna parameter files.
                .
                This is the 2011 post-library split version, hence not
                deprecated anymore.

extra-source-files:
  parfiles/rna_turner2004.par

library
  build-depends:
    base >3 && <5,
    bytestring        >= 0.9,
    bytestring-lexing >= 0.4,
    containers        >= 0.4,
    file-embed        >= 0.0.4.1,
    filepath          >= 1,
    iteratee          >= 0.8.8,
    mtl               >= 2,
    split             >= 0.1.4,
    vector            == 0.9.*   ,
    BiobaseTurner     == 0.2.2.3 ,
    BiobaseXNA        == 0.6.2.4 ,
    PrimitiveArray    == 0.2.1.1
  exposed-modules:
    Biobase.Vienna
    Biobase.Vienna.Default
    Biobase.Vienna.Export
    Biobase.Vienna.Import
    Biobase.Vienna.ImportPar
  ghc-options:
    -Odph -funbox-strict-fields -fspec-constr

executable ViennaConverter
  build-depends:
    cmdargs == 0.9.*
  main-is:
    ViennaConverter.hs
  ghc-options:
    -O2

source-repository head
  type: git
  location: git://github.com/choener/BiobaseVienna