BiobaseXNA-0.10.0.0: Efficient RNA/DNA/Protein Primary/Secondary Structure

Safe Haskell	None
Language	Haskell2010

Biobase.Primary.Nuc.XNA

Synopsis

Documentation

data XNA Source #

Combine both, RNA and DNA.

Instances

IsString [Letter * XNA] Source #
Methods fromString :: String -> [Letter * XNA] #
LetterChar * XNA Source #
Methods letterChar :: Letter XNA t -> Char Source # charLetter :: Char -> Letter XNA t Source #
MkPrimary * (Vector Char) XNA Source #
Methods primary :: XNA -> Primary (Vector Char) t Source #
Bounded (Letter * XNA) Source #
Methods minBound :: Letter * XNA # maxBound :: Letter * XNA #
Enum (Letter * XNA) Source #
Methods succ :: Letter * XNA -> Letter * XNA # pred :: Letter * XNA -> Letter * XNA # toEnum :: Int -> Letter * XNA # fromEnum :: Letter * XNA -> Int # enumFrom :: Letter * XNA -> [Letter * XNA] # enumFromThen :: Letter * XNA -> Letter * XNA -> [Letter * XNA] # enumFromTo :: Letter * XNA -> Letter * XNA -> [Letter * XNA] # enumFromThenTo :: Letter * XNA -> Letter * XNA -> Letter * XNA -> [Letter * XNA] #
Read (Letter * XNA) Source #
Methods readsPrec :: Int -> ReadS (Letter * XNA) # readList :: ReadS [Letter * XNA] # readPrec :: ReadPrec (Letter * XNA) # readListPrec :: ReadPrec [Letter * XNA] #
Show (Letter * XNA) Source #
Methods showsPrec :: Int -> Letter * XNA -> ShowS # show :: Letter * XNA -> String # showList :: [Letter * XNA] -> ShowS #
Degenerate (Letter * XNA) Source #
Methods fromDegenerate :: Char -> [Letter * XNA] Source # toDegenerate :: [Letter * XNA] -> Maybe Char Source #

pattern A :: Letter * XNA Source #

pattern C :: Letter * XNA Source #

pattern G :: Letter * XNA Source #

pattern T :: Letter * XNA Source #

pattern U :: Letter * XNA Source #

pattern N :: Letter * XNA Source #

charXNA :: Char -> Letter * XNA Source #

xnaChar :: Letter * XNA -> Char Source #

xnaSeq :: MkPrimary n XNA => n -> Primary XNA Source #