Biobase.Primary.Nuc.XNA

Documentation

data XNA

Combine both, RNA and DNA.

Instances

LetterChar XNA

Methods

letterChar :: Letter XNA -> Char

charLetter :: Char -> Letter XNA

Bounded (Letter XNA)

Methods

minBound :: Letter XNA

maxBound :: Letter XNA

Enum (Letter XNA)

Methods

succ :: Letter XNA -> Letter XNA

pred :: Letter XNA -> Letter XNA

toEnum :: Int -> Letter XNA

fromEnum :: Letter XNA -> Int

enumFrom :: Letter XNA -> [Letter XNA]

enumFromThen :: Letter XNA -> Letter XNA -> [Letter XNA]

enumFromTo :: Letter XNA -> Letter XNA -> [Letter XNA]

enumFromThenTo :: Letter XNA -> Letter XNA -> Letter XNA -> [Letter XNA]

Read (Letter XNA)

Methods

readsPrec :: Int -> ReadS (Letter XNA)

readList :: ReadS [Letter XNA]

readPrec :: ReadPrec (Letter XNA)

readListPrec :: ReadPrec [Letter XNA]

Show (Letter XNA)

Methods

showsPrec :: Int -> Letter XNA -> ShowS

show :: Letter XNA -> String

showList :: [Letter XNA] -> ShowS

IsString [Letter XNA]

Methods

fromString :: String -> [Letter XNA]

MkPrimary (Vector Char) XNA => FromJSON (Primary XNA)

Methods

parseJSON :: Value -> Parser (Primary XNA)

parseJSONList :: Value -> Parser [Primary XNA]

LetterChar XNA => ToJSON (Primary XNA)

Methods

toJSON :: Primary XNA -> Value

toEncoding :: Primary XNA -> Encoding

toJSONList :: [Primary XNA] -> Value

toEncodingList :: [Primary XNA] -> Encoding

Degenerate (Letter XNA)

Methods

fromDegenerate :: Char -> [Letter XNA]

toDegenerate :: [Letter XNA] -> Maybe Char

MkPrimary (Vector Char) XNA

Methods

primary :: Vector Char -> Primary XNA

pattern A :: Letter XNA

pattern C :: Letter XNA

pattern G :: Letter XNA

pattern T :: Letter XNA

pattern U :: Letter XNA

pattern N :: Letter XNA

charXNA :: Char -> Letter XNA

xnaChar :: Letter XNA -> Char

xnaSeq :: MkPrimary n XNA => n -> Primary XNA