The ClustalParser package

This is a package candidate release! Here you can preview how this package release will appear once published to the main package index (which can be accomplished via the 'maintain' link below). Please note that once a package has been published to the main package index it cannot be undone! Please consult the package uploading documentation for more information.

[maintain]

Warnings:

Currently contains parsers and datatypes for: clustalw2, clustalo

For more information on clustal Tools refer to http://www.clustal.org/

ClustalW2 is a general purpose DNA or protein multiple sequence alignment program for three or more sequences.

Clustal Omega is a new multiple sequence alignment program that uses seeded guide trees and HMM profile-profile techniques to generate alignments between three or more sequences.


[Skip to ReadMe]

Properties

Versions1.0.0, 1.0.1, 1.0.2, 1.0.3, 1.0.3, 1.1.0, 1.1.1, 1.1.2, 1.1.3, 1.1.4, 1.2.0, 1.2.1
Change logchangelog
Dependenciesbase (>=4.5 && <5), ClustalParser, cmdargs, parsec [details]
LicenseGPL
AuthorFlorian Eggenhofer
Maintaineregg@tbi.univie.ac.at
CategoryBioinformatics
Source repositoryhead: git clone https://github.com/eggzilla/ClustalParser
this: git clone https://github.com/eggzilla/ClustalParser/tree/1.0.3(tag 1.0.3)
ExecutablesClustalParserTest
UploadedTue Apr 21 09:00:17 UTC 2015 by FlorianEggenhofer

Modules

[Index]

Downloads

Maintainers' corner

For package maintainers and hackage trustees

Readme for ClustalParser-1.0.3

ClustalParser Build Status

Currently contains parsers and datatypes for: clustalw2, clustalo

Clustal tools are multipe sequence aligenment tools for biological sequences like DNA, RNA and Protein. For more information on clustal Tools refer to http://www.clustal.org/.

4 types of output are parsed