name: ClustalParser
-- The package version. See the Haskell package versioning policy (PVP)
-- for standards guiding when and how versions should be incremented.
-- http://www.haskell.org/haskellwiki/Package_versioning_policy
-- PVP summary: +-+------- breaking API changes
-- | | +----- non-breaking API additions
-- | | | +--- code changes with no API change
version: 1.1.4
synopsis: Libary for parsing Clustal tools output
description: Currently contains parsers and datatypes for: clustalw2, clustalo, mlocarna, cmalign
.
Clustal tools are multiple sequence alignment tools for biological sequence like DNA, RNA and Protein.
For more information on clustal Tools refer to .
.
Mlocarna is a multiple sequence alignment tool for RNA sequences with secondary structure output.
For more information on mlocarna refer to .
.
Cmalign is a multiple sequence alignment program based on RNA family models and produces
,among others, clustal output. It is part of infernal .
license: GPL
license-file: LICENSE
author: Florian Eggenhofer
maintainer: egg@tbi.univie.ac.at
-- copyright:
category: Bioinformatics
build-type: Simple
cabal-version: >=1.8
extra-source-files:
README.md changelog
source-repository head
type: git
location: https://github.com/eggzilla/ClustalParser
source-repository this
type: git
location: https://github.com/eggzilla/ClustalParser/tree/1.1.4
tag: 1.1.4
library
-- Modules exported by the library.
exposed-modules: Bio.ClustalParser
other-modules: Bio.ClustalData
-- Other library packages from which modules are imported.
build-depends: base >=4.5 && <5, parsec>=3.1.9, vector
-- compiler options
ghc-options: -Wall -O2 -fno-warn-unused-do-bind
-- Directories containing source files.
hs-source-dirs: src
executable ClustalParserTest
main-is: ClustalParserTest.hs
build-depends: base >= 4 && <= 5, cmdargs, ClustalParser, either-unwrap
-- compiler options
ghc-options: -Wall -O2
test-suite hspec
build-depends: base, parsec, ClustalParser, hspec >= 1.8
hs-source-dirs: test-suite
main-is: Spec.hs
type: exitcode-stdio-1.0