Resolving dependencies... Configuring primitive-0.6.1.0... Building primitive-0.6.1.0... Preprocessing library primitive-0.6.1.0... [ 1 of 10] Compiling Data.Primitive.Internal.Compat ( Data/Primitive/Internal/Compat.hs, dist/build/Data/Primitive/Internal/Compat.o ) [ 2 of 10] Compiling Data.Primitive.MachDeps ( Data/Primitive/MachDeps.hs, dist/build/Data/Primitive/MachDeps.o ) [ 3 of 10] Compiling Data.Primitive.Internal.Operations ( Data/Primitive/Internal/Operations.hs, dist/build/Data/Primitive/Internal/Operations.o ) [ 4 of 10] Compiling Control.Monad.Primitive ( Control/Monad/Primitive.hs, dist/build/Control/Monad/Primitive.o ) Control/Monad/Primitive.hs:41:1: Warning: Module ‘Control.Monad.Trans.Error’ is deprecated: Use Control.Monad.Trans.Except instead Control/Monad/Primitive.hs:100:11: Warning: In the use of type constructor or class ‘Error’ (imported from Control.Monad.Trans.Error): Deprecated: "Use Control.Monad.Trans.Except instead" Control/Monad/Primitive.hs:100:47: Warning: In the use of type constructor or class ‘ErrorT’ (imported from Control.Monad.Trans.Error): Deprecated: "Use Control.Monad.Trans.Except instead" Control/Monad/Primitive.hs:101:19: Warning: In the use of type constructor or class ‘ErrorT’ (imported from Control.Monad.Trans.Error): Deprecated: "Use Control.Monad.Trans.Except instead" [ 5 of 10] Compiling Data.Primitive.Types ( Data/Primitive/Types.hs, dist/build/Data/Primitive/Types.o ) [ 6 of 10] Compiling Data.Primitive.Array ( Data/Primitive/Array.hs, dist/build/Data/Primitive/Array.o ) [ 7 of 10] Compiling Data.Primitive.ByteArray ( Data/Primitive/ByteArray.hs, dist/build/Data/Primitive/ByteArray.o ) [ 8 of 10] Compiling Data.Primitive.Addr ( Data/Primitive/Addr.hs, dist/build/Data/Primitive/Addr.o ) [ 9 of 10] Compiling Data.Primitive ( Data/Primitive.hs, dist/build/Data/Primitive.o ) [10 of 10] Compiling Data.Primitive.MutVar ( Data/Primitive/MutVar.hs, dist/build/Data/Primitive/MutVar.o ) In-place registering primitive-0.6.1.0... Running Haddock for primitive-0.6.1.0... cabal: Haddock's internal GHC version must match the configured GHC version. The GHC version is 7.10.2 but haddock is using GHC version 7.8.3 Creating package registration file: /tmp/pkgConf-primitive-0.6.1336465782861021530.0 Installing library in /home/builder/hackage-server/build-cache/tmp-install/lib/x86_64-linux-ghc-7.10.2/primitive-0.6.1.0-5Jnw7oEuYtM9dmKXelGXVb Registering primitive-0.6.1.0... Installed primitive-0.6.1.0 Configuring vector-0.11.0.0... Building vector-0.11.0.0... Preprocessing library vector-0.11.0.0... [ 1 of 21] Compiling Data.Vector.Storable.Internal ( Data/Vector/Storable/Internal.hs, dist/build/Data/Vector/Storable/Internal.o ) [ 2 of 21] Compiling Data.Vector.Generic.Mutable.Base ( Data/Vector/Generic/Mutable/Base.hs, dist/build/Data/Vector/Generic/Mutable/Base.o ) [ 3 of 21] Compiling Data.Vector.Generic.Base ( Data/Vector/Generic/Base.hs, dist/build/Data/Vector/Generic/Base.o ) [ 4 of 21] Compiling Data.Vector.Fusion.Util ( Data/Vector/Fusion/Util.hs, dist/build/Data/Vector/Fusion/Util.o ) Data/Vector/Fusion/Util.hs:19:1: Warning: The import of ‘Control.Applicative’ is redundant except perhaps to import instances from ‘Control.Applicative’ To import instances alone, use: import Control.Applicative() [ 5 of 21] Compiling Data.Vector.Fusion.Bundle.Size ( Data/Vector/Fusion/Bundle/Size.hs, dist/build/Data/Vector/Fusion/Bundle/Size.o ) [ 6 of 21] Compiling Data.Vector.Internal.Check ( Data/Vector/Internal/Check.hs, dist/build/Data/Vector/Internal/Check.o ) [ 7 of 21] Compiling Data.Vector.Fusion.Stream.Monadic ( Data/Vector/Fusion/Stream/Monadic.hs, dist/build/Data/Vector/Fusion/Stream/Monadic.o ) Data/Vector/Fusion/Stream/Monadic.hs:93:1: Warning: The import of ‘Word’ from module ‘Data.Word’ is redundant [ 8 of 21] Compiling Data.Vector.Fusion.Bundle.Monadic ( Data/Vector/Fusion/Bundle/Monadic.hs, dist/build/Data/Vector/Fusion/Bundle/Monadic.o ) Data/Vector/Fusion/Bundle/Monadic.hs:105:1: Warning: The import of ‘Word’ from module ‘Data.Word’ is redundant [ 9 of 21] Compiling Data.Vector.Fusion.Bundle ( Data/Vector/Fusion/Bundle.hs, dist/build/Data/Vector/Fusion/Bundle.o ) Data/Vector/Fusion/Bundle.hs:114:1: Warning: Tab character [10 of 21] Compiling Data.Vector.Generic.Mutable ( Data/Vector/Generic/Mutable.hs, dist/build/Data/Vector/Generic/Mutable.o ) [11 of 21] Compiling Data.Vector.Generic.New ( Data/Vector/Generic/New.hs, dist/build/Data/Vector/Generic/New.o ) [12 of 21] Compiling Data.Vector.Generic ( Data/Vector/Generic.hs, dist/build/Data/Vector/Generic.o ) [13 of 21] Compiling Data.Vector.Primitive.Mutable ( Data/Vector/Primitive/Mutable.hs, dist/build/Data/Vector/Primitive/Mutable.o ) [14 of 21] Compiling Data.Vector.Primitive ( Data/Vector/Primitive.hs, dist/build/Data/Vector/Primitive.o ) Data/Vector/Primitive.hs:167:1: Warning: The import of ‘Data.Monoid’ is redundant except perhaps to import instances from ‘Data.Monoid’ To import instances alone, use: import Data.Monoid() [15 of 21] Compiling Data.Vector.Storable.Mutable ( Data/Vector/Storable/Mutable.hs, dist/build/Data/Vector/Storable/Mutable.o ) [16 of 21] Compiling Data.Vector.Storable ( Data/Vector/Storable.hs, dist/build/Data/Vector/Storable.o ) Data/Vector/Storable.hs:172:1: Warning: The import of ‘Data.Monoid’ is redundant except perhaps to import instances from ‘Data.Monoid’ To import instances alone, use: import Data.Monoid() [17 of 21] Compiling Data.Vector.Unboxed.Base ( Data/Vector/Unboxed/Base.hs, dist/build/Data/Vector/Unboxed/Base.o ) Data/Vector/Unboxed/Base.hs:33:1: Warning: The import of ‘Word’ from module ‘Data.Word’ is redundant [18 of 21] Compiling Data.Vector.Unboxed ( Data/Vector/Unboxed.hs, dist/build/Data/Vector/Unboxed.o ) Data/Vector/Unboxed.hs:189:1: Warning: The import of ‘Data.Monoid’ is redundant except perhaps to import instances from ‘Data.Monoid’ To import instances alone, use: import Data.Monoid() [19 of 21] Compiling Data.Vector.Unboxed.Mutable ( Data/Vector/Unboxed/Mutable.hs, dist/build/Data/Vector/Unboxed/Mutable.o ) [20 of 21] Compiling Data.Vector.Mutable ( Data/Vector/Mutable.hs, dist/build/Data/Vector/Mutable.o ) [21 of 21] Compiling Data.Vector ( Data/Vector.hs, dist/build/Data/Vector.o ) Data/Vector.hs:190:1: Warning: The import of ‘Data.Monoid’ is redundant except perhaps to import instances from ‘Data.Monoid’ To import instances alone, use: import Data.Monoid() In-place registering vector-0.11.0.0... Running Haddock for vector-0.11.0.0... cabal: Haddock's internal GHC version must match the configured GHC version. The GHC version is 7.10.2 but haddock is using GHC version 7.8.3 Creating package registration file: /tmp/pkgConf-vector-0.11.09439477391984210012.0 Installing library in /home/builder/hackage-server/build-cache/tmp-install/lib/x86_64-linux-ghc-7.10.2/vector-0.11.0.0-A9qWf1eecPQGJD12EBZIxF Registering vector-0.11.0.0... Installed vector-0.11.0.0 Configuring SeqAlign-0.1.0.0... Building SeqAlign-0.1.0.0... Preprocessing library SeqAlign-0.1.0.0... [1 of 1] Compiling Alignment ( Alignment.hs, dist/build/Alignment.o ) Alignment.hs:5:1: Warning: Module ‘Foreign.ForeignPtr.Safe’ is deprecated: Safe is now the default, please use Foreign.ForeignPtr instead Alignment.hs:39:10: Warning: No explicit implementation for either ‘poke’ or ‘pokeElemOff’ or ‘pokeByteOff’ In the instance declaration for ‘Storable KSWR’ cbits/ksw.c:29:17: fatal error: ksw.h: No such file or directory #include "ksw.h" ^ compilation terminated. Failed to install SeqAlign-0.1.0.0 cabal: Error: some packages failed to install: SeqAlign-0.1.0.0 failed during the building phase. The exception was: ExitFailure 1