name:                SeqAlign
version:             0.1.0.0
synopsis:            Sequence Alignment
description:         FFI wrappers for global and local string alignment functions
license:             BSD3
license-file:        LICENSE
author:              Rob O'Callahan
maintainer:          rcallahan@eurekagenomics.com
copyright:           (c) 2014-2015 Rob O'Callahan
build-type:          Simple
cabal-version:       >=1.10

library
  exposed-modules:     Alignment
  other-extensions:    OverloadedStrings
  build-depends:       base >=4.6 && <5, bytestring, vector
  c-sources:           cbits/editdist.c cbits/ksw.c cbits/sw.c
  include-dirs:        cbits
  default-language:    Haskell2010
  cc-options:          -O3 -fPIC