{- | This example is a copy of RGExample with the difference that (A^*)^i is used in the signature instead of just A^i. Also, the empty string is used instead of EPS. The purpose is to have a better relation to the examples in the thesis. -} module ADP.Tests.RGExampleStar where import ADP.Multi.All import ADP.Multi.Rewriting.All type RG_Algebra alphabet answer = ( [alphabet] -> answer, -- nil answer -> answer -> answer, -- left answer -> answer -> answer -> answer, -- pair answer -> answer -> answer -> answer -> answer -> answer -> answer, -- knot answer -> answer -> answer, -- knot1 answer -> answer, -- knot2 ([alphabet], [alphabet]) -> answer, -- basepair [alphabet] -> answer, -- base [answer] -> [answer] -- h ) infixl *** (***) :: (Eq b, Eq c) => RG_Algebra a b -> RG_Algebra a c -> RG_Algebra a (b,c) alg1 *** alg2 = (nil,left,pair,knot,knot1,knot2,basepair,base,h) where (nil',left',pair',knot',knot1',knot2',basepair',base',h') = alg1 (nil'',left'',pair'',knot'',knot1'',knot2'',basepair'',base'',h'') = alg2 nil a = (nil' a, nil'' a) left (b1,b2) (s1,s2) = (left' b1 s1, left'' b2 s2) pair (p1,p2) (s11,s21) (s12,s22) = (pair' p1 s11 s12, pair'' p2 s21 s22) knot (k11,k21) (k12,k22) (s11,s21) (s12,s22) (s13,s23) (s14,s24) = (knot' k11 k12 s11 s12 s13 s14, knot'' k21 k22 s21 s22 s23 s24) knot1 (p1,p2) (k1,k2) = (knot1' p1 k1, knot1'' p2 k2) knot2 (p1,p2) = (knot2' p1, knot2'' p2) basepair a = (basepair' a, basepair'' a) base a = (base' a, base'' a) h xs = [ (x1,x2) | x1 <- h' [ y1 | (y1,_) <- xs] , x2 <- h'' [ y2 | (y1,y2) <- xs, y1 == x1] ] data Start = Nil | Left' Start Start | Pair Start Start Start | Knot Start Start Start Start Start Start | Knot1 Start Start | Knot2 Start | BasePair (String, String) | Base String deriving (Eq, Show) enum :: RG_Algebra Char Start enum = (\_->Nil,Left',Pair,Knot,Knot1,Knot2,BasePair,Base,id) maxBasepairs :: RG_Algebra Char Int maxBasepairs = (nil,left,pair,knot,knot1,knot2,basepair,base,h) where nil _ = 0 left a b = a + b pair a b c = a + b + c knot a b c d e f = a + b + c + d + e + f knot1 a b = a + b knot2 a = a basepair _ = 1 base _ = 0 h [] = [] h xs = [maximum xs] maxKnots :: RG_Algebra Char Int maxKnots = (nil,left,pair,knot,knot1,knot2,basepair,base,h) where nil _ = 0 left _ b = b pair _ b c = b + c knot _ _ c d e f = 1 + c + d + e + f knot1 _ _ = 0 knot2 _ = 0 basepair _ = 0 base _ = 0 h [] = [] h xs = [maximum xs] -- The left part is the structure and the right part the reconstructed input. prettyprint :: RG_Algebra Char ([String],[String]) prettyprint = (nil,left,pair,knot,knot1,knot2,basepair,base,h) where nil _ = ([""],[""]) left (bl,br) (sl,sr) = ( [concat $ bl ++ sl], [concat $ br ++ sr] ) pair ([p1l,p2l],[p1r,p2r]) (s1l,s1r) (s2l,s2r) = ( [concat $ [p1l] ++ s1l ++ [p2l] ++ s2l], [concat $ [p1r] ++ s1r ++ [p2r] ++ s2r] ) knot ([k11l,k12l],[k11r,k12r]) ([k21l,k22l],[k21r,k22r]) (s1l,s1r) (s2l,s2r) (s3l,s3r) (s4l,s4r) = let (k11l',k12l') = square k11l k12l in ( [concat $ [k11l'] ++ s1l ++ [k21l] ++ s2l ++ [k12l'] ++ s3l ++ [k22l] ++ s4l], [concat $ [k11r] ++ s1r ++ [k21r] ++ s2r ++ [k12r] ++ s3r ++ [k22r] ++ s4r] ) knot1 ([p1l,p2l],[p1r,p2r]) ([k1l,k2l],[k1r,k2r]) = ( [concat $ [k1l] ++ [p1l], concat $ [p2l] ++ [k2l]], [concat $ [k1r] ++ [p1r], concat $ [p2r] ++ [k2r]] ) knot2 (pl,pr) = (pl, pr) basepair (b1,b2) = (["(",")"], [b1,b2]) base b = (["."], [b]) h = id square l r = (map (const '[') l, map (const ']') r) rgknot :: RG_Algebra Char answer -> String -> [answer] rgknot algebra inp = let (nil,left,pair,knot,knot1,knot2,basepair,base,h) = algebra rewritePair, rewriteKnot :: Dim1 rewritePair [p1,p2,s1,s2] = [p1,s1,p2,s2] rewriteKnot [k11,k12,k21,k22,s1,s2,s3,s4] = [k11,s1,k21,s2,k12,s3,k22,s4] s = tabulated1 $ yieldSize1 (0,Nothing) $ nil <<< "" >>> id1 ||| left <<< b ~~~ s >>> id1 ||| pair <<< p ~~~ s ~~~ s >>> rewritePair ||| knot <<< k ~~~ k ~~~ s ~~~ s ~~~ s ~~~ s >>> rewriteKnot ... h b = tabulated1 $ base <<< "a" >>> id1 ||| base <<< "u" >>> id1 ||| base <<< "c" >>> id1 ||| base <<< "g" >>> id1 p = tabulated2 $ basepair <<< ("a", "u") >>> id2 ||| basepair <<< ("u", "a") >>> id2 ||| basepair <<< ("c", "g") >>> id2 ||| basepair <<< ("g", "c") >>> id2 ||| basepair <<< ("g", "u") >>> id2 ||| basepair <<< ("u", "g") >>> id2 rewriteKnot1 :: Dim2 rewriteKnot1 [p1,p2,k1,k2] = ([k1,p1],[p2,k2]) k = tabulated2 $ yieldSize2 (1,Nothing) (1,Nothing) $ knot1 <<< p ~~~ k >>> rewriteKnot1 ||| knot2 <<< p >>> id2 z = mk inp tabulated1 = table1 z tabulated2 = table2 z in axiom z s