bio- A bioinformatics librarySource codeContentsIndex

This module implements the 2bit format for sequences.

Based on: Note! the description is not accurate, it is missing a reserved word in each sequence record.

There are also other, completely different ideas of the 2bit format, e.g.

decode2Bit :: ByteString -> [Sequence]
read2Bit :: FilePath -> IO [Sequence]
hRead2Bit :: Handle -> IO [Sequence]
decode2Bit :: ByteString -> [Sequence]Source
Parse a (lazy) ByteString as sequences in the 2bit format.
read2Bit :: FilePath -> IO [Sequence]Source
Extract sequences from a file in 2bit format.
hRead2Bit :: Handle -> IO [Sequence]Source
Extract sequences in the 2bit format from a handle.
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