 | bio-0.3.5: A bioinformatics library | Source code | Contents | Index |
| Bio.Alignment.SAlign |
| Contents |
Simple alignment of sequences
Standard alignment/edit distance
| local_score :: (Num a, Ord a) => SubstMx a -> a -> Sequence -> Sequence -> a |
| local_align :: (Num a, Ord a) => SubstMx a -> a -> Sequence -> Sequence -> EditList |
| global_score :: (Num a, Ord a) => SubstMx a -> a -> Sequence -> Sequence -> a |
| global_align :: (Num a, Ord a) => SubstMx a -> a -> Sequence -> Sequence -> EditList |
| local_score :: (Num a, Ord a) => SubstMx a -> a -> Sequence -> Sequence -> a | Source |
| local_align :: (Num a, Ord a) => SubstMx a -> a -> Sequence -> Sequence -> EditList | Source |
| global_score :: (Num a, Ord a) => SubstMx a -> a -> Sequence -> Sequence -> a | Source |
| global_align :: (Num a, Ord a) => SubstMx a -> a -> Sequence -> Sequence -> EditList | Source |