bio-0.4: A bioinformatics library Source code Contents Index

Bio.Sequence.Phd

Description

Parse phd files (phred base calling output).

Synopsis

readPhd :: FilePath -> IO (Sequence Nuc) hReadPhd :: Handle -> IO (Sequence Nuc)

Documentation

readPhd :: FilePath -> IO (Sequence Nuc) Source

Parse a .phd file, extracting the contents as a Sequence

hReadPhd :: Handle -> IO (Sequence Nuc) Source

Parse .phd contents from a handle

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