biohazard-0.6.15: bioinformatics support library

Safe HaskellNone
LanguageHaskell2010

Bio.Iteratee.IO.Handle

Contents

Description

Random and Binary IO with generic Iteratees. These functions use Handles for IO operations, and are provided for compatibility. When available, the File Descriptor based functions are preferred as these wastefully allocate memory rather than running in constant space.

Synopsis

File enumerators

enumHandle Source

Arguments

:: (MonadIO m, MonadMask m) 
=> Int

Buffer size (number of elements per read)

-> Handle 
-> Enumerator Bytes m a 

The (monadic) enumerator of a file Handle. This version enumerates over the entire contents of a file, in order, unless stopped by the iteratee. In particular, seeking is not supported. Data is read into a buffer of the specified size.

enumHandleCatch Source

Arguments

:: (IException e, MonadIO m, MonadMask m) 
=> Int

Buffer size (number of elements per read)

-> Handle 
-> (e -> m (Maybe EnumException)) 
-> Enumerator Bytes m a 

An enumerator of a file handle that catches exceptions raised by the Iteratee.

enumHandleRandom Source

Arguments

:: (MonadIO m, MonadMask m) 
=> Int

Buffer size (number of elements per read)

-> Handle 
-> Enumerator Bytes m a 

The enumerator of a Handle: a variation of enumHandle that supports RandomIO (seek requests). Data is read into a buffer of the specified size.

enumFile Source

Arguments

:: (MonadIO m, MonadMask m) 
=> Int

Buffer size

-> FilePath 
-> Enumerator Bytes m a 

enumFileRandom Source

Arguments

:: (MonadIO m, MonadMask m) 
=> Int

Buffer size

-> FilePath 
-> Enumerator Bytes m a 

Iteratee drivers

fileDriverHandle Source

Arguments

:: (MonadIO m, MonadMask m) 
=> Int

Buffer size (number of elements)

-> Iteratee Bytes m a 
-> FilePath 
-> m a 

Process a file using the given Iteratee. This function wraps enumHandle as a convenience.

fileDriverRandomHandle Source

Arguments

:: (MonadIO m, MonadMask m) 
=> Int

Buffer size (number of elements)

-> Iteratee Bytes m a 
-> FilePath 
-> m a 

A version of fileDriverHandle that supports seeking.