Name: biohazard Version: 1.0.0 x-revision: 1 Synopsis: bioinformatics support library Description: This is a collection of modules I separated from various bioinformatics tools. Category: Bioinformatics Homepage: https://bitbucket.org/ustenzel/biohazard License: BSD3 License-File: LICENSE Author: Udo Stenzel Maintainer: u.stenzel@web.de Copyright: (C) 2010-2017 Udo Stenzel Cabal-version: >= 1.10 Build-type: Simple Tested-With: GHC == 7.8.4, GHC == 7.10.3, GHC == 8.0.2, GHC == 8.2.1 source-repository head type: git location: https://bitbucket.org/ustenzel/biohazard.git Library Exposed-modules: Bio.Adna, Bio.Align, Bio.Bam, Bio.Bam.Evan, Bio.Bam.Fastq, Bio.Bam.Filter, Bio.Bam.Header, Bio.Bam.Index, Bio.Bam.Pileup, Bio.Bam.Reader Bio.Bam.Rec, Bio.Bam.Regions, Bio.Bam.Rmdup, Bio.Bam.Trim, Bio.Bam.Writer, Bio.Base, Bio.Iteratee, Bio.Iteratee.Base, Bio.Iteratee.Bgzf, Bio.Iteratee.Builder, Bio.Iteratee.Bytes, Bio.Iteratee.Exception, Bio.Iteratee.IO, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee.ZLib, Bio.Prelude, Bio.TwoBit, Bio.Util.MMap, Bio.Util.Numeric, Bio.Util.Zlib Build-depends: async >= 2.0 && < 2.2, attoparsec >= 0.10 && < 0.14, base >= 4.7 && < 4.11, base-prelude == 1.2.0.*, binary >= 0.7 && < 0.9, bytestring >= 0.10.2 && < 0.11, containers == 0.5.*, directory >= 1.2 && < 1.4, exceptions >= 0.6 && < 0.9, filepath >= 1.3 && < 1.5, hashable >= 1.0 && < 1.3, primitive >= 0.5 && < 0.7, random >= 1.0 && < 1.2, scientific == 0.3.*, stm == 2.4.*, text >= 1.0 && < 1.3, transformers >= 0.4.1 && < 0.6, unix >= 2.5 && < 2.8, unordered-containers >= 0.2.3 && < 0.3, vector >= 0.11 && < 0.13, vector-algorithms >= 0.3 && < 0.8, vector-th-unbox == 0.2.*, zlib == 0.6.* Ghc-options: -Wall Default-Language: Haskell2010 Default-Extensions: BangPatterns, DeriveDataTypeable, FlexibleContexts, FlexibleInstances, LambdaCase, MultiParamTypeClasses, NoImplicitPrelude, OverloadedStrings, RecordWildCards, TypeSynonymInstances Other-Extensions: CPP, DeriveGeneric, ExistentialQuantification, ForeignFunctionInterface, FunctionalDependencies, GeneralizedNewtypeDeriving, PatternGuards, Rank2Types, ScopedTypeVariables, TemplateHaskell, TupleSections, TypeFamilies, TypeOperators, UndecidableInstances Hs-source-dirs: src Include-dirs: src/cbits Install-Includes: myers_align.h C-sources: src/cbits/loops.c, src/cbits/mmap.c, src/cbits/myers_align.c, src/cbits/trim.c CC-options: -fPIC -- :vim:tw=132: