Build #3 for bioinformatics-toolkit-0.6.0
| Package | bioinformatics-toolkit-0.6.0 |
|---|
| Install | DependencyFailed bioinformatics-toolkit-0.6.0 |
|---|---|
| Docs | NotTried |
| Tests | NotTried |
| Time submitted | 2019-03-22 23:24:18.679241919 UTC |
|---|---|
| Compiler | ghc-8.6.3 |
| OS | linux |
| Arch | x86_64 |
| Dependencies | HsHTSLib-1.9.2, IntervalMap-0.6.1.0, aeson-1.4.2.0, aeson-pretty-0.8.7, attoparsec-0.13.2.2, base-4.12.0.0, bytestring-0.10.8.2, bytestring-lexing-0.5.0.2, case-insensitive-1.2.0.11, clustering-0.4.1, conduit-1.3.1.1, conduit-extra-1.3.1.1, containers-0.6.0.1, data-default-class-0.1.2.0, data-ordlist-0.4.7.0, double-conversion-2.0.2.0, hexpat-0.20.13, http-conduit-2.3.6.1, lens-4.17, math-functions-0.3.1.0, matrices-0.5.0, mtl-2.2.2, parallel-3.2.2.0, primitive-0.6.4.0, split-0.2.3.3, statistics-0.15.0.0, text-1.2.3.1, transformers-0.5.5.0, unordered-containers-0.2.10.0, vector-0.12.0.2, vector-algorithms-0.8.0.1, word8-0.1.3 |
| Flags | none |
Code Coverage
No Code Coverage was submitted for this report.
Build log
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Warning: The install command is a part of the legacy v1 style of cabal usage. Please switch to using either the new project style and the new-install command or the legacy v1-install alias as new-style projects will become the default in the next version of cabal-install. Please file a bug if you cannot replicate a working v1- use case with the new-style commands. For more information, see: https://wiki.haskell.org/Cabal/NewBuild Resolving dependencies... Starting List-0.6.2 Starting StateVar-1.1.1.1 Starting abstract-par-0.3.3 Starting IntervalMap-0.6.1.0 Building StateVar-1.1.1.1 Building abstract-par-0.3.3 Building List-0.6.2 Building IntervalMap-0.6.1.0 Completed abstract-par-0.3.3 Starting base-compat-0.10.5 Completed StateVar-1.1.1.1 Starting base-orphans-0.8 Building base-compat-0.10.5 Building base-orphans-0.8 Completed List-0.6.2 Starting basement-0.0.10 Building basement-0.0.10 Completed base-orphans-0.8 Starting blaze-builder-0.4.1.0 Building blaze-builder-0.4.1.0 Completed blaze-builder-0.4.1.0 Starting byteable-0.1.1 Building byteable-0.1.1 Completed base-compat-0.10.5 Starting bytestring-lexing-0.5.0.2 Building bytestring-lexing-0.5.0.2 Completed IntervalMap-0.6.1.0 Starting cabal-doctest-1.0.6 Completed byteable-0.1.1 Starting call-stack-0.1.0 Building cabal-doctest-1.0.6 Building call-stack-0.1.0 Completed call-stack-0.1.0 Starting cereal-0.5.8.0 Building cereal-0.5.8.0 Completed cabal-doctest-1.0.6 Starting cmdargs-0.10.20 Completed bytestring-lexing-0.5.0.2 Starting data-default-class-0.1.2.0 Building cmdargs-0.10.20 Building data-default-class-0.1.2.0 Completed data-default-class-0.1.2.0 Starting data-ordlist-0.4.7.0 Building data-ordlist-0.4.7.0 Completed data-ordlist-0.4.7.0 Starting dlist-0.8.0.5 Building dlist-0.8.0.5 Completed cereal-0.5.8.0 Starting double-conversion-2.0.2.0 Building double-conversion-2.0.2.0 Completed dlist-0.8.0.5 Starting hashable-1.2.7.0 Building hashable-1.2.7.0 Completed hashable-1.2.7.0 Starting hourglass-0.2.12 Completed double-conversion-2.0.2.0 Starting integer-logarithms-1.0.2.2 Building hourglass-0.2.12 Building integer-logarithms-1.0.2.2 Completed integer-logarithms-1.0.2.2 Starting mime-types-0.1.0.9 Building mime-types-0.1.0.9 Completed cmdargs-0.10.20 Starting network-2.8.0.0 Completed hourglass-0.2.12 Starting network-uri-2.6.1.0 Building network-uri-2.6.1.0 Completed mime-types-0.1.0.9 Starting parallel-3.2.2.0 Building parallel-3.2.2.0 Building network-2.8.0.0 Completed network-uri-2.6.1.0 Starting primitive-0.6.4.0 Completed parallel-3.2.2.0 Starting random-1.1 Building primitive-0.6.4.0 Building random-1.1 Completed random-1.1 Starting reflection-2.1.4 Building reflection-2.1.4 Completed basement-0.0.10 Starting semigroups-0.18.5 Building semigroups-0.18.5 Completed semigroups-0.18.5 Starting split-0.2.3.3 Building split-0.2.3.3 Completed network-2.8.0.0 Starting tagged-0.8.6 Building tagged-0.8.6 Completed split-0.2.3.3 Starting th-abstraction-0.2.11.0 Completed reflection-2.1.4 Starting time-locale-compat-0.1.1.5 Building th-abstraction-0.2.11.0 Building time-locale-compat-0.1.1.5 Completed time-locale-compat-0.1.1.5 Starting transformers-compat-0.6.2 Completed tagged-0.8.6 Starting unliftio-core-0.1.2.0 Building transformers-compat-0.6.2 Building unliftio-core-0.1.2.0 Completed primitive-0.6.4.0 Starting utf8-string-1.0.1.1 Building utf8-string-1.0.1.1 Completed unliftio-core-0.1.2.0 Starting void-0.7.2 Building void-0.7.2 Completed th-abstraction-0.2.11.0 Starting word8-0.1.3 Building word8-0.1.3 Completed transformers-compat-0.6.2 Starting zlib-0.6.2 Completed void-0.7.2 Starting contravariant-1.5 Building zlib-0.6.2 Building contravariant-1.5 Completed word8-0.1.3 Starting cookie-0.4.4 Completed utf8-string-1.0.1.1 Starting unordered-containers-0.2.10.0 Building cookie-0.4.4 Building unordered-containers-0.2.10.0 Completed contravariant-1.5 Starting case-insensitive-1.2.0.11 Completed cookie-0.4.4 Starting async-2.2.1 Building case-insensitive-1.2.0.11 Building async-2.2.1 Completed zlib-0.6.2 Starting uuid-types-1.0.3 Completed case-insensitive-1.2.0.11 Starting monad-par-extras-0.3.3 Building uuid-types-1.0.3 Building monad-par-extras-0.3.3 Completed async-2.2.1 Starting abstract-deque-0.3 Building abstract-deque-0.3 Completed uuid-types-1.0.3 Starting memory-0.14.18 Completed monad-par-extras-0.3.3 Starting socks-0.5.6 Completed abstract-deque-0.3 Starting distributive-0.6 Building memory-0.14.18 Building socks-0.5.6 Completed unordered-containers-0.2.10.0 Starting vector-0.12.0.2 Building distributive-0.6 Building vector-0.12.0.2 Completed socks-0.5.6 Starting scientific-0.3.6.2 Building scientific-0.3.6.2 Completed distributive-0.6 Starting transformers-base-0.4.5.2 Building transformers-base-0.4.5.2 Completed transformers-base-0.4.5.2 Starting exceptions-0.10.0 Building exceptions-0.10.0 Completed scientific-0.3.6.2 Starting hexpat-0.20.13 Completed memory-0.14.18 Starting http-types-0.12.3 Failed to install hexpat-0.20.13 Build log ( /home/builder/.cabal/logs/ghc-8.6.3/hexpat-0.20.13-APjsUQcw9a06j9Ii4BW0W4.log ): cabal: Entering directory '/tmp/cabal-tmp-13382/hexpat-0.20.13' Configuring hexpat-0.20.13... cabal: Missing dependency on a foreign library: * Missing (or bad) C library: expat This problem can usually be solved by installing the system package that provides this library (you may need the "-dev" version). If the library is already installed but in a non-standard location then you can use the flags --extra-include-dirs= and --extra-lib-dirs= to specify where it is.If the library file does exist, it may contain errors that are caught by the C compiler at the preprocessing stage. In this case you can re-run configure with the verbosity flag -v3 to see the error messages. cabal: Leaving directory '/tmp/cabal-tmp-13382/hexpat-0.20.13' Starting typed-process-0.2.4.0 Building http-types-0.12.3 Building typed-process-0.2.4.0 Completed exceptions-0.10.0 Completed typed-process-0.2.4.0 Completed http-types-0.12.3 Completed vector-0.12.0.2 cabal: Error: some packages failed to install: bioinformatics-toolkit-0.6.0-4OEU2oZAPL2KuN0bSyYJtU depends on bioinformatics-toolkit-0.6.0 which failed to install. hexpat-0.20.13-APjsUQcw9a06j9Ii4BW0W4 failed during the configure step. The exception was: ExitFailure 1
Test log
No test log was submitted for this report.