bioinformatics-toolkit-0.7.0: A collection of bioinformatics tools

Safe Haskell	None
Language	Haskell2010

Bio.ChIPSeq.FragLen

Synopsis

fragLength :: (Int, Int) -> [BED] -> Int
naiveCCWithSmooth :: Int -> [BED] -> [Int] -> [(Int, Int)]

Documentation

fragLength :: (Int, Int) -> [BED] -> Int Source #

estimate fragment length for a ChIP-seq experiment

naiveCCWithSmooth :: Int -> [BED] -> [Int] -> [(Int, Int)] Source #

calcuate cross corrlation with different shifts