Name:                biopsl
Version:             0.4
Synopsis:            Library and executables for working with PSL files
Description:         The library contains the functionality for reading and writing
		     PSL files (alignment data, e.g. from BLAT output). It duplicates
		     code from (and is incompatible with) the "bio" library.
Homepage:            http://biohaskell.org/
License:             LGPL
Author:              Ketil Malde
Maintainer:          ketil@malde.org
Stability:           Experimental
Category:            Bioinformatics
Build-type:          Simple
Cabal-version:       >=1.6

Source-repository this
   Type:      darcs
   Location:  http://malde.org/~ketil/biohaskell/biosff
   Tag:       0.3

Library
  Exposed-modules: Bio.Alignment.PSL
  Build-depends:   base >= 3 && < 5, biocore >= 0.1, bytestring
  Hs-Source-Dirs:  src
  Ghc-Options:     -Wall

Executable pslstats
  Main-Is:        PslStats.hs
  Hs-Source-Dirs: src, examples
  Build-depends:  unordered-containers
  Ghc-Options:    -Wall

Executable psluniq
  Main-Is:        PslUniq.hs
  Hs-Source-Dirs: src, examples
  Ghc-Options:    -Wall

Executable pslfilter
  Main-Is:        PslFilter.hs
  Hs-Source-Dirs: src, examples
  Build-Depends:  cmdargs
  Ghc-Options:    -Wall

Executable pslcov
  Main-Is:        PslCov.hs
  Hs-Source-Dirs: src, examples
  Ghc-Options:    -Wall