biosff-0.3.4: Library and executables for working with SFF files

Index

avgBio.Sequence.SFF_filters
basesBio.Sequence.SFF
baseToFlowPosBio.Sequence.SFF
clipFlowsBio.Sequence.SFF_filters
clipSeqBio.Sequence.SFF_filters
clip_adapter_leftBio.Sequence.SFF
clip_adapter_rightBio.Sequence.SFF
clip_qual_leftBio.Sequence.SFF
clip_qual_rightBio.Sequence.SFF
CommonHeader 
1 (Type/Class)Bio.Sequence.SFF
2 (Data Constructor)Bio.Sequence.SFF
convertBio.Sequence.SFF
cumulative_indexBio.Sequence.SFF
dateBio.Sequence.SFF
decodeReadNameBio.Sequence.SFF
DiscardFilterBio.Sequence.SFF_filters
discard_dotsBio.Sequence.SFF_filters
discard_emptyBio.Sequence.SFF_filters
discard_keyBio.Sequence.SFF_filters
discard_lengthBio.Sequence.SFF_filters
discard_mixedBio.Sequence.SFF_filters
dlengthBio.Sequence.SFF_filters
encodeReadNameBio.Sequence.SFF
find_primerBio.Sequence.SFF_filters
FlowBio.Sequence.SFF
flowBio.Sequence.SFF
flowgramBio.Sequence.SFF
flowgram_fmtBio.Sequence.SFF
flowToBasePosBio.Sequence.SFF
flow_dataBio.Sequence.SFF
flow_indexBio.Sequence.SFF
flow_lengthBio.Sequence.SFF
flx_linkerBio.Sequence.SFF_filters
getRBBio.Sequence.SFF
IndexBio.Sequence.SFF
index_lengthBio.Sequence.SFF
index_offsetBio.Sequence.SFF
keyBio.Sequence.SFF
key_lengthBio.Sequence.SFF
masked_basesBio.Sequence.SFF
name_lengthBio.Sequence.SFF
num_basesBio.Sequence.SFF
num_readsBio.Sequence.SFF
packFlowsBio.Sequence.SFF
putRBBio.Sequence.SFF
QualBio.Sequence.SFF
qual20Bio.Sequence.SFF_filters
QualDataBio.Sequence.SFF
qualityBio.Sequence.SFF
rapid_adapterBio.Sequence.SFF_filters
ReadBlock 
1 (Type/Class)Bio.Sequence.SFF
2 (Data Constructor)Bio.Sequence.SFF
ReadHeader 
1 (Type/Class)Bio.Sequence.SFF
2 (Data Constructor)Bio.Sequence.SFF
ReadName 
1 (Type/Class)Bio.Sequence.SFF
2 (Data Constructor)Bio.Sequence.SFF
readSFFBio.Sequence.SFF
read_headerBio.Sequence.SFF
read_nameBio.Sequence.SFF
recoverSFFBio.Sequence.SFF
regionBio.Sequence.SFF
rna_adapterBio.Sequence.SFF_filters
rna_adapter2Bio.Sequence.SFF_filters
rna_adapter3Bio.Sequence.SFF_filters
SeqDataBio.Sequence.SFF
SFF 
1 (Type/Class)Bio.Sequence.SFF
2 (Data Constructor)Bio.Sequence.SFF
sigintBio.Sequence.SFF_filters
testBio.Sequence.SFF
timeBio.Sequence.SFF
ti_adapter_bBio.Sequence.SFF_filters
ti_linkerBio.Sequence.SFF_filters
trimBio.Sequence.SFF
TrimFilterBio.Sequence.SFF_filters
trimFlowsBio.Sequence.SFF
trimFromToBio.Sequence.SFF
trim_primerBio.Sequence.SFF_filters
trim_qual20Bio.Sequence.SFF_filters
trim_sigintBio.Sequence.SFF_filters
unpackFlowsBio.Sequence.SFF
writeSFFBio.Sequence.SFF
writeSFF'Bio.Sequence.SFF
x_locBio.Sequence.SFF
y_locBio.Sequence.SFF