Name: biostockholm Version: 0.3.4 Synopsis: Parsing and rendering of Stockholm files (used by Pfam, Rfam and Infernal). License: BSD3 License-file: LICENSE Author: Felipe Lessa Maintainer: felipe.lessa@gmail.com Category: Bioinformatics Build-type: Simple Cabal-version: >=1.8 Extra-source-files: benchmarks/benchmark_v0.1.hs benchmarks/benchmark_v0.2.hs tests/runtests.hs Description: Parsing and rendering of files in Stockholm 1.0 format. Among the users of the Stockholm format are Pfam, Rfam and Infernal. These files hold information about families of proteins or non-coding RNAs. For more information, please see: . * . * . * Source-repository head Type: git Location: https://github.com/meteficha/biostockholm Library Hs-Source-Dirs: src Exposed-modules: Bio.Sequence.Stockholm Bio.Sequence.Stockholm.Document Bio.Sequence.Stockholm.Stream Ghc-Options: -Wall Build-depends: base >= 3 && < 5 , containers >= 0.2 && < 0.6 , bytestring == 0.9.* , deepseq >= 1.1 && < 1.4 , conduit == 0.4.* , attoparsec == 0.10.* , attoparsec-conduit == 0.4.* , blaze-builder == 0.3.* , blaze-builder-conduit == 0.4.* , biocore >= 0.1 && < 0.3 Test-suite runtests Type: exitcode-stdio-1.0 Hs-Source-Dirs: tests Main-is: runtests.hs Ghc-Options: -Wall Build-depends: base , containers , bytestring , conduit , zlib-conduit , biocore , transformers >= 0.2 , hspec == 0.9.* , HUnit , QuickCheck , biostockholm