cabal-version: 1.12

-- This file has been generated from package.yaml by hpack version 0.33.0.
--
-- see: https://github.com/sol/hpack
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-- hash: fe5f3bd32c503a44c34349ccfa5bf4ef5ec52540df5c2ce4637127a0b33394df

name:           cobot-io
version:        0.1.3.18
synopsis:       Biological data file formats and IO
description:    Please see the README on GitHub at <https://github.com/biocad/cobot-io#readme>
category:       Bio
homepage:       https://github.com/biocad/cobot-io#readme
bug-reports:    https://github.com/biocad/cobot-io/issues
author:         Pavel Yakovlev, Bogdan Neterebskii, Alexander Sadovnikov
maintainer:     pavel@yakovlev.me
copyright:      2020, Biocad
license:        BSD3
license-file:   LICENSE
build-type:     Simple
extra-source-files:
    README.md
    ChangeLog.md

source-repository head
  type: git
  location: https://github.com/biocad/cobot-io

library
  exposed-modules:
      Bio.ABI
      Bio.ABI.Clean
      Bio.ABI.Decode
      Bio.FASTA
      Bio.FASTA.Parser
      Bio.FASTA.Type
      Bio.FASTA.Writer
      Bio.GB
      Bio.GB.Parser
      Bio.GB.Type
      Bio.GB.Writer
      Bio.MAE
      Bio.MAE.Parser
      Bio.MAE.Type
      Bio.MMTF
      Bio.MMTF.Decode
      Bio.MMTF.Decode.Codec
      Bio.MMTF.Decode.MessagePack
      Bio.MMTF.MessagePack
      Bio.MMTF.Type
      Bio.PDB
      Bio.PDB.BondRestoring
      Bio.PDB.Functions
      Bio.PDB.Parser
      Bio.PDB.Reader
      Bio.PDB.Type
      Bio.PDB.Writer
      Bio.Sequence
      Bio.Sequence.Basecalled
      Bio.Sequence.Basecalled.Type
      Bio.Sequence.Class
      Bio.Sequence.Functions.Marking
      Bio.Sequence.Functions.Sequence
      Bio.Sequence.Functions.Weight
      Bio.Sequence.Utilities
      Bio.Structure
      Bio.Structure.Functions
      Bio.Uniprot
      Bio.Uniprot.Parser
      Bio.Uniprot.Type
      Bio.Utils.Map
      Bio.Utils.Vector
  other-modules:
      Paths_cobot_io
  hs-source-dirs:
      src
  default-extensions: DeriveGeneric DeriveFunctor DeriveFoldable DeriveAnyClass FlexibleInstances InstanceSigs MultiParamTypeClasses RecordWildCards ScopedTypeVariables OverloadedStrings TypeApplications TypeFamilies DataKinds ConstraintKinds TypeOperators TemplateHaskell FlexibleContexts
  build-depends:
      array >=0.5 && <0.6
    , attoparsec >=0.10 && <0.14
    , base >=4.7 && <5
    , binary >=0.8.3.0 && <1.0
    , bytestring >=0.10.8.1 && <0.11
    , containers >=0.5.7.1 && <0.7
    , data-msgpack >=0.0.9 && <0.1
    , deepseq >=1.4 && <1.5
    , http-conduit >=2.3 && <2.4
    , hyraxAbif >=0.2.3.15 && <0.2.4.0
    , lens >=4.16 && <5.0
    , linear >=1.20 && <1.22
    , mtl >=2.2.1 && <2.3.0
    , split
    , text >=1.2.2.1 && <1.3
    , vector
  default-language: Haskell2010

test-suite cobot-io-test
  type: exitcode-stdio-1.0
  main-is: Spec.hs
  other-modules:
      ABISpec
      FastaParserSpec
      FASTASpec
      FastaWriterSpec
      GBParserSpec
      GBWriterSpec
      MAEParserSpec
      MAESpec
      MMTFSpec
      PDBParserSpec
      PDBSpec
      PDBWriterSpec
      SequenceSpec
      StructureSpec
      UniprotSpec
      Paths_cobot_io
  hs-source-dirs:
      test
  default-extensions: OverloadedStrings TypeFamilies
  ghc-options: -threaded -rtsopts -with-rtsopts=-N
  build-depends:
      QuickCheck >=2.9.2 && <2.15
    , array >=0.5 && <0.6
    , attoparsec >=0.10 && <0.14
    , base >=4.7 && <5
    , binary >=0.8.3.0 && <1.0
    , bytestring >=0.10.8.1 && <0.11
    , cobot-io
    , containers >=0.5.7.1 && <0.7
    , data-msgpack >=0.0.9 && <0.1
    , deepseq >=1.4 && <1.5
    , directory
    , hspec >=2.4.1 && <2.8
    , http-conduit >=2.3 && <2.4
    , hyraxAbif >=0.2.3.15 && <0.2.4.0
    , lens >=4.16 && <5.0
    , linear
    , mtl >=2.2.1 && <2.3.0
    , neat-interpolation >=0.3
    , split
    , text >=1.2.2.1 && <1.3
    , vector
  default-language: Haskell2010