diskhash: Disk-based hash table

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Disk-based hash table


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Versions0.0.1.0, 0.0.1.1, 0.0.1.2, 0.0.2.1, 0.0.2.3, 0.0.3.0, 0.0.3.2, 0.0.4.0, 0.0.4.2, 0.0.4.2
Change logChangeLog
Dependenciesbase (>4.8 && <5), bytestring (==0.10.*) [details]
LicenseMIT
AuthorLuis Pedro Coelho
MaintainerLuis Pedro Coelho
CategoryData
Bug trackerhttps://github.com/luispedro/diskhash/issues
Source repositoryhead: git clone https://github.com/luispedro/diskhash
UploadedMon Nov 11 15:16:54 UTC 2019 by luispedro

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Readme for diskhash-0.0.4.2

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Disk-based hashtable

Travis License: MIT

A simple disk-based hash table (i.e., persistent hash table).

It is a hashtable implemented on memory-mapped disk, so that it can be loaded with a single mmap() system call and used in memory directly (being as fast as an in-memory hashtable once it is loaded from disk).

The code is in C, wrappers are provided for Python, Haskell, and C++. The wrappers follow similar APIs with variations to accommodate the language specificity. They all use the same underlying code, so you can open a hashtable created in C from Haskell, modify it within your Haskell code, and later open the result in Python.

Cross-language functionality will only work for simple types where you can control their binary representation (64-bit integers, for example).

Reading does not touch the disk representation at all and, thus, can be done on top of read-only files or using multiple threads (and different processes will share the memory: the operating system does that for you). Writing or modifying values is, however, not thread-safe.

Examples

The following examples all create a hashtable to store longs (int64_t), then set the value associated with the key "key" to 9. In the current API, the maximum size of the keys needs to be pre-specified, which is the value 15 below.

Raw C

#include <stdio.h>
#include <inttypes.h>
#include "diskhash.h"

int main(void) {
    HashTableOpts opts;
    opts.key_maxlen = 15;
    opts.object_datalen = sizeof(int64_t);
    char* err = NULL;
    HashTable* ht = dht_open("testing.dht", opts, O_RDWR|O_CREAT, &err);
    if (!ht) {
        if (!err) err = "Unknown error";
        fprintf(stderr, "Failed opening hash table: %s.\n", err);
        return 1;
    }
    long i = 9;
    dht_insert(ht, "key", &i);
    
    long* val = (long*) dht_lookup(ht, "key");
    printf("Looked up value: %l\n", *val);

    dht_free(ht);
    return 0;
}

The C API relies on error codes and error strings (the &err argument above). The header file has decent documentation.

Haskell

In Haskell, you have different types/functions for read-write and read-only hashtables. Read-write operations are IO operations, read-only hashtables are pure.

Read write example:

import Data.DiskHash
import Data.Int
main = do
    ht <- htOpenRW "testing.dht" 15
    htInsertRW ht "key" (9 :: Int64)
    val <- htLookupRW "key" ht
    print val

Read only example (htLookupRO is pure in this case):

import Data.DiskHash
import Data.Int
main = do
    ht <- htOpenRO "testing.dht" 15
    let val :: Int64
        val = htLookupRO "key" ht
    print val

Python

Python's interface is based on the struct module. For example, 'll' refers to a pair of 64-bit ints (longs):

import diskhash
tb = diskhash.StructHash("testing.dht", 15, 'll', 'rw')
tb.insert("key", 1, 2)
print(tb.lookup("key"))

The Python interface is currently Python 3 only. Patches to extend it to 2.7 are welcome, but it's not a priority.

C++

In C++, a simple wrapper is defined, which provides a modicum of type-safety. You use the DiskHash<T> template. Additionally, errors are reported through exceptions (both std::bad_alloc and std::runtime_error can be thrown) and not return codes.

#include <iostream>
#include <string>

#include <diskhash.hpp>

int main() {
    const int key_maxlen = 15;
    dht::DiskHash<uint64_t> ht("testing.dht", key_maxlen, dht::DHOpenRW);
    std::string line;
    uint64_t ix = 0;
    while (std::getline(std::cine, line)) {
        if (line.length() > key_maxlen) {
            std::cerr << "Key too long: '" << line << "'. Aborting.\n";
            return 2;
        }
        const bool inserted = ht.insert(line.c_str(), ix);
        if (!inserted) {
            std::cerr  << "Found repeated key '" << line << "' (ignored).\n";
        }
        ++ix;
    }
    return 0;
}

Stability

This is beta software. It is good enough that I am using it, but the API can change in the future with little warning. The binary format is versioned (the magic string encodes its version, so changes can be detected and you will get an error message in the future rather than some silent misbehaviour.

Automated unit testing ensures that basic mistakes will not go uncaught.

Limitations

License: MIT