Build #7 for flowsim-0.3.5
| Package | flowsim-0.3.5 |
|---|
| Install | DependencyFailed biosff-0.3.7.1 |
|---|---|
| Docs | NotTried |
| Tests | NotTried |
| Time submitted | 2016-12-19 20:11:47.353666 UTC |
|---|---|
| Compiler | ghc-8.0.1.20161018 |
| OS | linux |
| Arch | x86_64 |
| Dependencies | MonadRandom-0.4.2.3, array-0.5.1.1, base-4.9.0.0, bytestring-0.10.8.1, cmdargs-0.10.14, base-4.9.0.0, base-4.9.0.0, MonadRandom-0.4.2.3, array-0.5.1.1, base-4.9.0.0, biocore-0.3.1, biofasta-0.0.3, biosff-0.3.7.1, bytestring-0.10.8.1, cmdargs-0.10.14, containers-0.5.7.1, directory-1.2.6.2, mtl-2.2.1, random-1.1, base-4.9.0.0, base-4.9.0.0, bytestring-0.10.8.1, containers-0.5.7.1, base-4.9.0.0, cmdargs-0.10.14, base-4.9.0.0, cmdargs-0.10.14 |
| Flags | none |
Code Coverage
No Code Coverage was submitted for this report.
Build log
[view raw]
Resolving dependencies...
Configuring mtl-2.2.1...
Configuring cmdargs-0.10.14...
Building cmdargs-0.10.14...
Building mtl-2.2.1...
Configuring random-1.1...
Installed mtl-2.2.1
Building random-1.1...
Installed random-1.1
Configuring text-1.2.2.1...
Building text-1.2.2.1...
Configuring transformers-compat-0.5.1.4...
Installed cmdargs-0.10.14
Building transformers-compat-0.5.1.4...
Installed transformers-compat-0.5.1.4
Configuring MonadRandom-0.4.2.3...
Building MonadRandom-0.4.2.3...
Installed MonadRandom-0.4.2.3
Installed text-1.2.2.1
Configuring system-filepath-0.4.13.4...
Building system-filepath-0.4.13.4...
Installed system-filepath-0.4.13.4
Configuring stringable-0.1.3...
Building stringable-0.1.3...
Installed stringable-0.1.3
Configuring biocore-0.3.1...
Building biocore-0.3.1...
Installed biocore-0.3.1
Downloading biosff-0.3.7.1...
Configuring biofasta-0.0.3...
Configuring biosff-0.3.7.1...
Building biofasta-0.0.3...
Building biosff-0.3.7.1...
Installed biofasta-0.0.3
Failed to install biosff-0.3.7.1
Build log ( /home/builder/.cabal/logs/biosff-0.3.7.1.log ):
cabal: Entering directory '/tmp/cabal-tmp-11597/biosff-0.3.7.1'
Configuring biosff-0.3.7.1...
Building biosff-0.3.7.1...
Preprocessing library biosff-0.3.7.1...
[1 of 3] Compiling Bio.Sequence.SFF_name ( src/Bio/Sequence/SFF_name.hs, dist/build/Bio/Sequence/SFF_name.o )
[2 of 3] Compiling Bio.Sequence.SFF ( src/Bio/Sequence/SFF.hs, dist/build/Bio/Sequence/SFF.o )
src/Bio/Sequence/SFF.hs:68:32: warning: [-Wdeprecations]
In the use of ‘runGetState’ (imported from Data.Binary.Get):
Deprecated: "Use runGetIncremental instead. This function will be removed."
src/Bio/Sequence/SFF.hs:75:22: warning: [-Wdeprecations]
In the use of ‘runGetState’ (imported from Data.Binary.Get):
Deprecated: "Use runGetIncremental instead. This function will be removed."
[3 of 3] Compiling Bio.Sequence.SFF_filters ( src/Bio/Sequence/SFF_filters.hs, dist/build/Bio/Sequence/SFF_filters.o )
Preprocessing executable 'flower' for biosff-0.3.7.1...
[1 of 8] Compiling Print ( src/Flower/Print.hs, dist/build/flower/flower-tmp/Print.o )
src/Flower/Print.hs:8:1: warning: [-Wunused-imports]
The import of ‘Data.Monoid’ is redundant
except perhaps to import instances from ‘Data.Monoid’
To import instances alone, use: import Data.Monoid()
[2 of 8] Compiling Options ( src/Flower/Options.hs, dist/build/flower/flower-tmp/Options.o )
[3 of 8] Compiling Fork ( src/Flower/Fork.hs, dist/build/flower/flower-tmp/Fork.o )
[4 of 8] Compiling Bio.Sequence.SFF_name ( src/Bio/Sequence/SFF_name.hs, dist/build/flower/flower-tmp/Bio/Sequence/SFF_name.o )
[5 of 8] Compiling Bio.Sequence.SFF ( src/Bio/Sequence/SFF.hs, dist/build/flower/flower-tmp/Bio/Sequence/SFF.o )
src/Bio/Sequence/SFF.hs:68:32: warning: [-Wdeprecations]
In the use of ‘runGetState’ (imported from Data.Binary.Get):
Deprecated: "Use runGetIncremental instead. This function will be removed."
src/Bio/Sequence/SFF.hs:75:22: warning: [-Wdeprecations]
In the use of ‘runGetState’ (imported from Data.Binary.Get):
Deprecated: "Use runGetIncremental instead. This function will be removed."
[6 of 8] Compiling Bio.Sequence.SFF_filters ( src/Bio/Sequence/SFF_filters.hs, dist/build/flower/flower-tmp/Bio/Sequence/SFF_filters.o )
[7 of 8] Compiling Metrics ( src/Flower/Metrics.hs, dist/build/flower/flower-tmp/Metrics.o )
[8 of 8] Compiling Main ( src/Flower/Main.hs, dist/build/flower/flower-tmp/Main.o )
src/Flower/Main.hs:235:7: error:
• Non type-variable argument
in the constraint: MArray (STUArray s) Int m
(Use FlexibleContexts to permit this)
• When checking the inferred type
ins1 :: forall (m :: * -> *).
MArray (STUArray s) Int m =>
(Char, Flow) -> m ()
In the second argument of ‘($)’, namely
‘do { let zero = ...;
a <- zero;
c <- zero;
g <- zero;
.... }’
In the expression:
runST
$ do { let zero = ...;
a <- zero;
c <- zero;
g <- zero;
.... }
cabal: Leaving directory '/tmp/cabal-tmp-11597/biosff-0.3.7.1'
cabal: Error: some packages failed to install:
biosff-0.3.7.1 failed during the building phase. The exception was:
ExitFailure 1
flowsim-0.3.5 depends on biosff-0.3.7.1 which failed to install.
Test log
No test log was submitted for this report.