{- git-annex command - - Copyright 2010-2012 Joey Hess - - Licensed under the GNU GPL version 3 or higher. -} {-# LANGUAGE BangPatterns #-} module Command.Unused where import qualified Data.Set as S import Control.Monad.ST import qualified Data.Map as M import Common.Annex import Command import Logs.Unused import Annex.Content import Logs.Location import Logs.Transfer import qualified Annex import qualified Git import qualified Git.Command import qualified Git.Ref import qualified Git.Branch import qualified Git.LsFiles as LsFiles import qualified Git.DiffTree as DiffTree import qualified Backend import qualified Remote import qualified Annex.Branch import Annex.CatFile import Types.Key import Git.FilePath import Logs.View (is_branchView) import Utility.Bloom cmd :: [Command] cmd = [withOptions [unusedFromOption] $ command "unused" paramNothing seek SectionMaintenance "look for unused file content"] unusedFromOption :: Option unusedFromOption = fieldOption ['f'] "from" paramRemote "remote to check for unused content" seek :: CommandSeek seek = withNothing start {- Finds unused content in the annex. -} start :: CommandStart start = do from <- Annex.getField $ optionName unusedFromOption let (name, action) = case from of Nothing -> (".", checkUnused) Just "." -> (".", checkUnused) Just "here" -> (".", checkUnused) Just n -> (n, checkRemoteUnused n) showStart "unused" name next action checkUnused :: CommandPerform checkUnused = chain 0 [ check "" unusedMsg $ findunused =<< Annex.getState Annex.fast , check "bad" staleBadMsg $ staleKeysPrune gitAnnexBadDir False , check "tmp" staleTmpMsg $ staleKeysPrune gitAnnexTmpObjectDir True ] where findunused True = do showNote "fast mode enabled; only finding stale files" return [] findunused False = do showAction "checking for unused data" -- InAnnex, not InRepository because if a direct mode -- file exists, it is obviously not unused. excludeReferenced =<< getKeysPresent InAnnex chain _ [] = next $ return True chain v (a:as) = do v' <- a v chain v' as checkRemoteUnused :: String -> CommandPerform checkRemoteUnused name = go =<< fromJust <$> Remote.byNameWithUUID (Just name) where go r = do showAction "checking for unused data" _ <- check "" (remoteUnusedMsg r) (remoteunused r) 0 next $ return True remoteunused r = excludeReferenced <=< loggedKeysFor $ Remote.uuid r check :: FilePath -> ([(Int, Key)] -> String) -> Annex [Key] -> Int -> Annex Int check file msg a c = do l <- a let unusedlist = number c l unless (null l) $ showLongNote $ msg unusedlist updateUnusedLog file $ M.fromList unusedlist return $ c + length l number :: Int -> [a] -> [(Int, a)] number _ [] = [] number n (x:xs) = (n+1, x) : number (n+1) xs table :: [(Int, Key)] -> [String] table l = " NUMBER KEY" : map cols l where cols (n,k) = " " ++ pad 6 (show n) ++ " " ++ key2file k pad n s = s ++ replicate (n - length s) ' ' staleTmpMsg :: [(Int, Key)] -> String staleTmpMsg t = unlines $ ["Some partially transferred data exists in temporary files:"] ++ table t ++ [dropMsg Nothing] staleBadMsg :: [(Int, Key)] -> String staleBadMsg t = unlines $ ["Some corrupted files have been preserved by fsck, just in case:"] ++ table t ++ [dropMsg Nothing] unusedMsg :: [(Int, Key)] -> String unusedMsg u = unusedMsg' u ["Some annexed data is no longer used by any files:"] [dropMsg Nothing] unusedMsg' :: [(Int, Key)] -> [String] -> [String] -> String unusedMsg' u header trailer = unlines $ header ++ table u ++ ["(To see where data was previously used, try: git log --stat -S'KEY')"] ++ trailer remoteUnusedMsg :: Remote -> [(Int, Key)] -> String remoteUnusedMsg r u = unusedMsg' u ["Some annexed data on " ++ name ++ " is not used by any files:"] [dropMsg $ Just r] where name = Remote.name r dropMsg :: Maybe Remote -> String dropMsg Nothing = dropMsg' "" dropMsg (Just r) = dropMsg' $ " --from " ++ Remote.name r dropMsg' :: String -> String dropMsg' s = "\nTo remove unwanted data: git-annex dropunused" ++ s ++ " NUMBER\n" {- Finds keys in the list that are not referenced in the git repository. - - Strategy: - - * Build a bloom filter of all keys referenced by symlinks. This - is the fastest one to build and will filter out most keys. - * If keys remain, build a second bloom filter of keys referenced by - all branches. - * The list is streamed through these bloom filters lazily, so both will - exist at the same time. This means that twice the memory is used, - but they're relatively small, so the added complexity of using a - mutable bloom filter does not seem worthwhile. - * Generating the second bloom filter can take quite a while, since - it needs enumerating all keys in all git branches. But, the common - case, if the second filter is needed, is for some keys to be globally - unused, and in that case, no short-circuit is possible. - Short-circuiting if the first filter filters all the keys handles the - other common case. -} excludeReferenced :: [Key] -> Annex [Key] excludeReferenced ks = runfilter firstlevel ks >>= runfilter secondlevel where runfilter _ [] = return [] -- optimisation runfilter a l = bloomFilter show l <$> genBloomFilter show a firstlevel = withKeysReferencedM secondlevel = withKeysReferencedInGit {- Finds items in the first, smaller list, that are not - present in the second, larger list. - - Constructing a single set, of the list that tends to be - smaller, appears more efficient in both memory and CPU - than constructing and taking the S.difference of two sets. -} exclude :: Ord a => [a] -> [a] -> [a] exclude [] _ = [] -- optimisation exclude smaller larger = S.toList $ remove larger $ S.fromList smaller where remove a b = foldl (flip S.delete) b a {- A bloom filter capable of holding half a million keys with a - false positive rate of 1 in 1000 uses around 8 mb of memory, - so will easily fit on even my lowest memory systems. -} bloomCapacity :: Annex Int bloomCapacity = fromMaybe 500000 . annexBloomCapacity <$> Annex.getGitConfig bloomAccuracy :: Annex Int bloomAccuracy = fromMaybe 1000 . annexBloomAccuracy <$> Annex.getGitConfig bloomBitsHashes :: Annex (Int, Int) bloomBitsHashes = do capacity <- bloomCapacity accuracy <- bloomAccuracy case safeSuggestSizing capacity (1 / fromIntegral accuracy) of Left e -> do warning $ "bloomfilter " ++ e ++ "; falling back to sane value" -- precaulculated value for 500000 (1/1000) return (8388608,10) Right v -> return v {- Creates a bloom filter, and runs an action, such as withKeysReferenced, - to populate it. - - The action is passed a callback that it can use to feed values into the - bloom filter. - - Once the action completes, the mutable filter is frozen - for later use. -} genBloomFilter :: Hashable t => (v -> t) -> ((v -> Annex ()) -> Annex b) -> Annex (Bloom t) genBloomFilter convert populate = do (numbits, numhashes) <- bloomBitsHashes bloom <- lift $ newMB (cheapHashes numhashes) numbits _ <- populate $ \v -> lift $ insertMB bloom (convert v) lift $ unsafeFreezeMB bloom where lift = liftIO . stToIO bloomFilter :: Hashable t => (v -> t) -> [v] -> Bloom t -> [v] bloomFilter convert l bloom = filter (\k -> convert k `notElemB` bloom) l {- Given an initial value, folds it with each key referenced by - symlinks in the git repo. -} withKeysReferenced :: v -> (Key -> v -> v) -> Annex v withKeysReferenced initial a = withKeysReferenced' Nothing initial folda where folda k _ v = return $ a k v {- Runs an action on each referenced key in the git repo. -} withKeysReferencedM :: (Key -> Annex ()) -> Annex () withKeysReferencedM a = withKeysReferenced' Nothing () calla where calla k _ _ = a k {- Folds an action over keys and files referenced in a particular directory. -} withKeysFilesReferencedIn :: FilePath -> v -> (Key -> FilePath -> v -> Annex v) -> Annex v withKeysFilesReferencedIn = withKeysReferenced' . Just withKeysReferenced' :: Maybe FilePath -> v -> (Key -> FilePath -> v -> Annex v) -> Annex v withKeysReferenced' mdir initial a = do (files, clean) <- getfiles r <- go initial files liftIO $ void clean return r where getfiles = case mdir of Nothing -> ifM isBareRepo ( return ([], return True) , do top <- fromRepo Git.repoPath inRepo $ LsFiles.allFiles [top] ) Just dir -> inRepo $ LsFiles.inRepo [dir] go v [] = return v go v (f:fs) = do x <- Backend.lookupFile f case x of Nothing -> go v fs Just k -> do !v' <- a k f v go v' fs withKeysReferencedInGit :: (Key -> Annex ()) -> Annex () withKeysReferencedInGit a = do current <- inRepo Git.Branch.currentUnsafe shaHead <- maybe (return Nothing) (inRepo . Git.Ref.sha) current showref >>= mapM_ (withKeysReferencedInGitRef a) . relevantrefs (shaHead, current) where showref = inRepo $ Git.Command.pipeReadStrict [Param "show-ref"] relevantrefs headRef = addHead headRef . filter ourbranches . map (separate (== ' ')) . lines nubRefs = map (Git.Ref . snd) . nubBy (\(x, _) (y, _) -> x == y) ourbranchend = '/' : Git.fromRef Annex.Branch.name ourbranches (_, b) = not (ourbranchend `isSuffixOf` b) && not ("refs/synced/" `isPrefixOf` b) && not (is_branchView (Git.Ref b)) addHead headRef refs = case headRef of -- if HEAD diverges from all branches (except the branch it -- points to), run the actions on staged keys (and keys -- that are only present in the work tree if the repo is -- non bare) (Just (Git.Ref x), Just (Git.Ref b)) | all (\(x',b') -> x /= x' || b == b') refs -> Git.Ref.headRef : nubRefs (filter ((/= x) . fst) refs) _ -> nubRefs refs {- Runs an action on keys referenced in the given Git reference which - differ from those referenced in the index. -} withKeysReferencedInGitRef :: (Key -> Annex ()) -> Git.Ref -> Annex () withKeysReferencedInGitRef a ref = do showAction $ "checking " ++ Git.Ref.describe ref bare <- isBareRepo (ts,clean) <- inRepo $ if bare then DiffTree.diffIndex ref else DiffTree.diffWorkTree ref let lookAtWorkingTree = not bare && ref == Git.Ref.headRef forM_ ts $ tKey lookAtWorkingTree >=> maybe noop a liftIO $ void clean where tKey True = Backend.lookupFile . getTopFilePath . DiffTree.file tKey False = fileKey . takeFileName . decodeBS <$$> catFile ref . getTopFilePath . DiffTree.file {- Looks in the specified directory for bad/tmp keys, and returns a list - of those that might still have value, or might be stale and removable. - - Also, stale keys that can be proven to have no value are deleted. -} staleKeysPrune :: (Git.Repo -> FilePath) -> Bool -> Annex [Key] staleKeysPrune dirspec nottransferred = do contents <- dirKeys dirspec dups <- filterM inAnnex contents let stale = contents `exclude` dups dir <- fromRepo dirspec liftIO $ forM_ dups $ \t -> removeFile $ dir keyFile t if nottransferred then do inprogress <- S.fromList . map (transferKey . fst) <$> getTransfers return $ filter (`S.notMember` inprogress) stale else return stale data UnusedMaps = UnusedMaps { unusedMap :: UnusedMap , unusedBadMap :: UnusedMap , unusedTmpMap :: UnusedMap } withUnusedMaps :: (UnusedMaps -> Int -> CommandStart) -> CommandSeek withUnusedMaps a params = do unused <- readUnusedMap "" unusedbad <- readUnusedMap "bad" unusedtmp <- readUnusedMap "tmp" let m = unused `M.union` unusedbad `M.union` unusedtmp let unusedmaps = UnusedMaps unused unusedbad unusedtmp seekActions $ return $ map (a unusedmaps) $ concatMap (unusedSpec m) params unusedSpec :: UnusedMap -> String -> [Int] unusedSpec m spec | spec == "all" = if M.null m then [] else [fst (M.findMin m)..fst (M.findMax m)] | "-" `isInfixOf` spec = range $ separate (== '-') spec | otherwise = maybe badspec (: []) (readish spec) where range (a, b) = case (readish a, readish b) of (Just x, Just y) -> [x..y] _ -> badspec badspec = error $ "Expected number or range, not \"" ++ spec ++ "\"" {- Seek action for unused content. Finds the number in the maps, and - calls one of 3 actions, depending on the type of unused file. -} startUnused :: String -> (Key -> CommandPerform) -> (Key -> CommandPerform) -> (Key -> CommandPerform) -> UnusedMaps -> Int -> CommandStart startUnused message unused badunused tmpunused maps n = search [ (unusedMap maps, unused) , (unusedBadMap maps, badunused) , (unusedTmpMap maps, tmpunused) ] where search [] = error $ show n ++ " not valid (run git annex unused for list)" search ((m, a):rest) = case M.lookup n m of Nothing -> search rest Just key -> do showStart message (show n) next $ a key