You can put this directory into your PATH, or symlink the programs in this directory to anyplace already in your PATH, and use git-annex the same as if you'd installed it using a package manager. Or, you can use the runshell script in this directory to start a shell that is configured to use git-annex and the other utilities included in this bundle, including git, gpg, rsync, ssh, etc. This should work on any Linux system of the appropriate architecture. More or less. How it works: This directory tree contains a lot of libraries and programs that git-annex needs. But it's not a chroot. Instead, runshell sets a lot of environment variables to cause files from here to be used, and a shim around the binaries arranges for them to be run with the libraries in here. It shouldn't even be dependent on the host system's glibc libraries. All that's needed is a kernel that supports the glibc included in this bundle.