### Please describe the problem. I have a main annex with ~2TB of data. In the past is was using SHA256 then I migrated to SHA256E . Recently it was becoming quite full so I took some spare HD and cloned it and moved data from the main to the spares. To my surprise, the main annex disk usage did not go down a bit. It took me some time to understand why . The problem is exemplified by the shell script . In short, if a annex is migrated to a new backend and afterwards files are moved, then the hardlinks are broken, and disk usage doubles. ### What steps will reproduce the problem? run above script ### What version of git-annex are you using? On what operating system? 5.20141125 on Debian Jessie amd64 ### Please provide any additional information below. Of course a simple solution would be to drop all unused files. This is ugly , though, because it does not distinguish between (1) unused files that are previous copies of files I care about (2) unused files that are due to the problem described in the example, and that I do not care about. A more complex but more elegant solution would be: (a) when a file is migrated , the old and new objects in the annex are hardlinked; moreover two symlinks should be creates, so that git-annex knows at a glance which two files are hardlinked (see for example) (b) when moving of copying files, all hardlinked versions whould be move/copied (c) when dropping , an option may be used to specify if all hardlinked versions should be dropped alltogether ### bye and thanks, A. ### ps I tried to attach two files to this bug report but failed