{-# LANGUAGE DataKinds #-} {-# LANGUAGE DeriveDataTypeable #-} {-# LANGUAGE DeriveGeneric #-} {-# LANGUAGE NoImplicitPrelude #-} {-# LANGUAGE OverloadedStrings #-} {-# OPTIONS_GHC -fno-warn-unused-imports #-} -- | -- Module : Network.Google.Genomics.Types -- Copyright : (c) 2015-2016 Brendan Hay -- License : Mozilla Public License, v. 2.0. -- Maintainer : Brendan Hay -- Stability : auto-generated -- Portability : non-portable (GHC extensions) -- module Network.Google.Genomics.Types ( -- * Service Configuration genomicsService -- * OAuth Scopes , genomicsScope , cloudPlatformScope , genomicsReadOnlyScope , storageReadWriteScope , bigQueryScope -- * ImportVariantsRequestInfoMergeConfig , ImportVariantsRequestInfoMergeConfig , importVariantsRequestInfoMergeConfig , ivrimcAddtional -- * ReadInfo , ReadInfo , readInfo , riAddtional -- * Exon , Exon , exon , eStart , eEnd , eFrame -- * Status , Status , status , sDetails , sCode , sMessage -- * OperationSchema , OperationSchema , operationSchema , osAddtional -- * VariantAnnotationEffect , VariantAnnotationEffect (..) -- * Variant , Variant , variant , vVariantSetId , vCreated , vStart , vAlternateBases , vReferenceName , vNames , vEnd , vReferenceBases , vId , vQuality , vFilter , vInfo , vCalls -- * Annotation , Annotation , annotation , aVariant , aAnnotationSetId , aStart , aReverseStrand , aReferenceId , aReferenceName , aName , aEnd , aId , aType , aTranscript , aInfo -- * ListBasesResponse , ListBasesResponse , listBasesResponse , lbrNextPageToken , lbrOffSet , lbrSequence -- * ListOperationsResponse , ListOperationsResponse , listOperationsResponse , lorNextPageToken , lorOperations -- * GetIAMPolicyRequest , GetIAMPolicyRequest , getIAMPolicyRequest -- * CancelOperationRequest , CancelOperationRequest , cancelOperationRequest -- * DataSet , DataSet , dataSet , dsName , dsId , dsProjectId , dsCreateTime -- * Read' , Read' , read' , rFragmentLength , rDuplicateFragment , rReadGroupSetId , rNextMatePosition , rFailedVendorQualityChecks , rAlignment , rFragmentName , rNumberReads , rId , rSecondaryAlignment , rReadGroupId , rSupplementaryAlignment , rAlignedSequence , rProperPlacement , rInfo , rReadNumber , rAlignedQuality -- * OperationMetadataLabels , OperationMetadataLabels , operationMetadataLabels , omlAddtional -- * VariantCall , VariantCall , variantCall , vcGenotypeLikelihood , vcCallSetName , vcPhaseset , vcCallSetId , vcGenotype , vcInfo -- * BatchCreateAnnotationsRequest , BatchCreateAnnotationsRequest , batchCreateAnnotationsRequest , bcarAnnotations , bcarRequestId -- * MergeVariantsRequest , MergeVariantsRequest , mergeVariantsRequest , mvrVariants , mvrVariantSetId , mvrInfoMergeConfig -- * ReadGroup , ReadGroup , readGroup , reaReferenceSetId , reaPrograms , reaExperiment , reaName , reaDataSetId , reaId , reaSampleId , reaPredictedInsertSize , reaDescription , reaInfo -- * Operation , Operation , operation , oDone , oError , oResponse , oName , oMetadata -- * SearchReferenceSetsRequest , SearchReferenceSetsRequest , searchReferenceSetsRequest , srsrMD5checksums , srsrAccessions , srsrPageToken , srsrAssemblyId , srsrPageSize -- * Empty , Empty , empty -- * AnnotationSetType , AnnotationSetType (..) -- * SearchReferencesResponse , SearchReferencesResponse , searchReferencesResponse , srrNextPageToken , srrReferences -- * VariantSetMetadata , VariantSetMetadata , variantSetMetadata , vsmValue , vsmKey , vsmId , vsmType , vsmNumber , vsmDescription , vsmInfo -- * CallSet , CallSet , callSet , csCreated , csName , csId , csSampleId , csVariantSetIds , csInfo -- * CoverageBucket , CoverageBucket , coverageBucket , cbRange , cbMeanCoverage -- * VariantAnnotation , VariantAnnotation , variantAnnotation , vaEffect , vaClinicalSignificance , vaAlternateBases , vaGeneId , vaConditions , vaType , vaTranscriptIds -- * VariantAnnotationClinicalSignificance , VariantAnnotationClinicalSignificance (..) -- * SearchReadGroupSetsRequest , SearchReadGroupSetsRequest , searchReadGroupSetsRequest , srgsrDataSetIds , srgsrName , srgsrPageToken , srgsrPageSize -- * Reference , Reference , reference , refLength , refSourceAccessions , refMD5checksum , refName , refNcbiTaxonId , refId , refSourceURI -- * VariantCallInfo , VariantCallInfo , variantCallInfo , vciAddtional -- * ReadGroupInfo , ReadGroupInfo , readGroupInfo , rgiAddtional -- * StatusDetailsItem , StatusDetailsItem , statusDetailsItem , sdiAddtional -- * SearchCallSetsResponse , SearchCallSetsResponse , searchCallSetsResponse , scsrNextPageToken , scsrCallSets -- * SetIAMPolicyRequest , SetIAMPolicyRequest , setIAMPolicyRequest , siprPolicy -- * SearchReadsRequest , SearchReadsRequest , searchReadsRequest , srrStart , srrReadGroupIds , srrReferenceName , srrEnd , srrPageToken , srrPageSize , srrReadGroupSetIds -- * OperationMetadataRequest , OperationMetadataRequest , operationMetadataRequest , omrAddtional -- * MergeVariantsRequestInfoMergeConfig , MergeVariantsRequestInfoMergeConfig , mergeVariantsRequestInfoMergeConfig , mvrimcAddtional -- * VariantInfo , VariantInfo , variantInfo , viAddtional -- * Experiment , Experiment , experiment , eInstrumentModel , ePlatformUnit , eSequencingCenter , eLibraryId -- * SearchVariantSetsRequest , SearchVariantSetsRequest , searchVariantSetsRequest , svsrDataSetIds , svsrPageToken , svsrPageSize -- * AnnotationInfo , AnnotationInfo , annotationInfo , aiAddtional -- * SearchAnnotationsResponse , SearchAnnotationsResponse , searchAnnotationsResponse , sarAnnotations , sarNextPageToken -- * SearchAnnotationSetsRequest , SearchAnnotationSetsRequest , searchAnnotationSetsRequest , sasrReferenceSetId , sasrTypes , sasrDataSetIds , sasrName , sasrPageToken , sasrPageSize -- * ImportReadGroupSetsRequestPartitionStrategy , ImportReadGroupSetsRequestPartitionStrategy (..) -- * SearchVariantsResponse , SearchVariantsResponse , searchVariantsResponse , svrVariants , svrNextPageToken -- * OperationMetadataRuntimeMetadata , OperationMetadataRuntimeMetadata , operationMetadataRuntimeMetadata , omrmAddtional -- * ClinicalCondition , ClinicalCondition , clinicalCondition , ccExternalIds , ccNames , ccConceptId , ccOmimId -- * SearchCallSetsRequest , SearchCallSetsRequest , searchCallSetsRequest , scsrName , scsrPageToken , scsrVariantSetIds , scsrPageSize -- * Entry , Entry , entry , eStatus , eAnnotation -- * SearchReadsResponse , SearchReadsResponse , searchReadsResponse , sNextPageToken , sAlignments -- * Program , Program , program , pPrevProgramId , pName , pVersion , pId , pCommandLine -- * SearchReferencesRequest , SearchReferencesRequest , searchReferencesRequest , sReferenceSetId , sMD5checksums , sAccessions , sPageToken , sPageSize -- * BatchCreateAnnotationsResponse , BatchCreateAnnotationsResponse , batchCreateAnnotationsResponse , bcarEntries -- * CodingSequence , CodingSequence , codingSequence , csStart , csEnd -- * AnnotationType , AnnotationType (..) -- * SearchReferenceSetsResponse , SearchReferenceSetsResponse , searchReferenceSetsResponse , srsrNextPageToken , srsrReferenceSets -- * Range , Range , range , rStart , rReferenceName , rEnd -- * ReadGroupSet , ReadGroupSet , readGroupSet , rgsReferenceSetId , rgsName , rgsDataSetId , rgsId , rgsInfo , rgsReadGroups , rgsFilename -- * Xgafv , Xgafv (..) -- * ExportReadGroupSetRequest , ExportReadGroupSetRequest , exportReadGroupSetRequest , ergsrReferenceNames , ergsrExportURI , ergsrProjectId -- * ImportVariantsResponse , ImportVariantsResponse , importVariantsResponse , ivrCallSetIds -- * ListCoverageBucketsResponse , ListCoverageBucketsResponse , listCoverageBucketsResponse , lcbrNextPageToken , lcbrBucketWidth , lcbrCoverageBuckets -- * TestIAMPermissionsRequest , TestIAMPermissionsRequest , testIAMPermissionsRequest , tiprPermissions -- * ImportReadGroupSetsResponse , ImportReadGroupSetsResponse , importReadGroupSetsResponse , irgsrReadGroupSetIds -- * LinearAlignment , LinearAlignment , linearAlignment , laCigar , laMAppingQuality , laPosition -- * AnnotationSet , AnnotationSet , annotationSet , asReferenceSetId , asName , asDataSetId , asId , asType , asSourceURI , asInfo -- * VariantSet , VariantSet , variantSet , vsReferenceSetId , vsName , vsDataSetId , vsReferenceBounds , vsMetadata , vsId , vsDescription -- * CigarUnitOperation , CigarUnitOperation (..) -- * VariantSetMetadataType , VariantSetMetadataType (..) -- * TestIAMPermissionsResponse , TestIAMPermissionsResponse , testIAMPermissionsResponse , tiamprPermissions -- * ListDataSetsResponse , ListDataSetsResponse , listDataSetsResponse , ldsrNextPageToken , ldsrDataSets -- * ImportReadGroupSetsRequest , ImportReadGroupSetsRequest , importReadGroupSetsRequest , irgsrReferenceSetId , irgsrDataSetId , irgsrSourceURIs , irgsrPartitionStrategy -- * ImportVariantsRequest , ImportVariantsRequest , importVariantsRequest , ivrVariantSetId , ivrFormat , ivrInfoMergeConfig , ivrNormalizeReferenceNames , ivrSourceURIs -- * ExternalId , ExternalId , externalId , eiSourceName , eiId -- * CigarUnit , CigarUnit , cigarUnit , cuOperation , cuOperationLength , cuReferenceSequence -- * Policy , Policy , policy , polEtag , polVersion , polBindings -- * ExportVariantSetRequest , ExportVariantSetRequest , exportVariantSetRequest , evsrBigQueryDataSet , evsrBigQueryTable , evsrFormat , evsrCallSetIds , evsrProjectId -- * VariantAnnotationType , VariantAnnotationType (..) -- * OperationMetadata , OperationMetadata , operationMetadata , omClientId , omStartTime , omEvents , omEndTime , omLabels , omProjectId , omCreateTime , omRuntimeMetadata , omRequest -- * ImportVariantsRequestFormat , ImportVariantsRequestFormat (..) -- * SearchAnnotationsRequest , SearchAnnotationsRequest , searchAnnotationsRequest , sarStart , sarReferenceId , sarReferenceName , sarEnd , sarPageToken , sarAnnotationSetIds , sarPageSize -- * SearchVariantSetsResponse , SearchVariantSetsResponse , searchVariantSetsResponse , svsrNextPageToken , svsrVariantSets -- * SearchVariantsRequest , SearchVariantsRequest , searchVariantsRequest , svrStart , svrCallSetIds , svrReferenceName , svrEnd , svrMaxCalls , svrPageToken , svrVariantName , svrVariantSetIds , svrPageSize -- * ExportVariantSetRequestFormat , ExportVariantSetRequestFormat (..) -- * AnnotationSetInfo , AnnotationSetInfo , annotationSetInfo , asiAddtional -- * ComputeEngine , ComputeEngine , computeEngine , ceZone , ceDiskNames , ceMachineType , ceInstanceName -- * SearchAnnotationSetsResponse , SearchAnnotationSetsResponse , searchAnnotationSetsResponse , sasrNextPageToken , sasrAnnotationSets -- * CallSetInfo , CallSetInfo , callSetInfo , csiAddtional -- * VariantSetMetadataInfo , VariantSetMetadataInfo , variantSetMetadataInfo , vsmiAddtional -- * OperationResponse , OperationResponse , operationResponse , orAddtional -- * Transcript , Transcript , transcript , tGeneId , tCodingSequence , tExons -- * OperationEvent , OperationEvent , operationEvent , oeStartTime , oeEndTime , oeDescription -- * ReferenceBound , ReferenceBound , referenceBound , rbUpperBound , rbReferenceName -- * UndeleteDataSetRequest , UndeleteDataSetRequest , undeleteDataSetRequest -- * Binding , Binding , binding , bMembers , bRole -- * Position , Position , position , pReverseStrand , pReferenceName , pPosition -- * RuntimeMetadata , RuntimeMetadata , runtimeMetadata , rmComputeEngine -- * SearchReadGroupSetsResponse , SearchReadGroupSetsResponse , searchReadGroupSetsResponse , srgsrNextPageToken , srgsrReadGroupSets -- * ReadGroupSetInfo , ReadGroupSetInfo , readGroupSetInfo , rgsiAddtional -- * ReferenceSet , ReferenceSet , referenceSet , rsSourceAccessions , rsReferenceIds , rsMD5checksum , rsNcbiTaxonId , rsId , rsAssemblyId , rsSourceURI , rsDescription ) where import Network.Google.Genomics.Types.Product import Network.Google.Genomics.Types.Sum import Network.Google.Prelude -- | Default request referring to version 'v1' of the Genomics API. This contains the host and root path used as a starting point for constructing service requests. genomicsService :: ServiceConfig genomicsService = defaultService (ServiceId "genomics:v1") "genomics.googleapis.com" -- | View and manage Genomics data genomicsScope :: Proxy '["https://www.googleapis.com/auth/genomics"] genomicsScope = Proxy; -- | View and manage your data across Google Cloud Platform services cloudPlatformScope :: Proxy '["https://www.googleapis.com/auth/cloud-platform"] cloudPlatformScope = Proxy; -- | View Genomics data genomicsReadOnlyScope :: Proxy '["https://www.googleapis.com/auth/genomics.readonly"] genomicsReadOnlyScope = Proxy; -- | Manage your data in Google Cloud Storage storageReadWriteScope :: Proxy '["https://www.googleapis.com/auth/devstorage.read_write"] storageReadWriteScope = Proxy; -- | View and manage your data in Google BigQuery bigQueryScope :: Proxy '["https://www.googleapis.com/auth/bigquery"] bigQueryScope = Proxy;