/* -*- mode: C -*- */ /* vim:set ts=4 sw=4 sts=4 et: */ /* IGraph library. Copyright (C) 2005-2012 Gabor Csardi 334 Harvard street, Cambridge, MA 02139 USA This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA */ long int no_of_nodes = igraph_vcount(graph); long int node, i, j, nn; igraph_adjlist_t allneis; igraph_vector_int_t *neis1, *neis2; long int neilen1, neilen2, deg1; long int *neis; long int maxdegree; igraph_vector_int_t order; igraph_vector_int_t rank; igraph_vector_t degree; igraph_vector_int_init(&order, no_of_nodes); IGRAPH_FINALLY(igraph_vector_int_destroy, &order); IGRAPH_VECTOR_INIT_FINALLY(°ree, no_of_nodes); IGRAPH_CHECK(igraph_degree(graph, °ree, igraph_vss_all(), IGRAPH_ALL, IGRAPH_LOOPS)); maxdegree = (long int) igraph_vector_max(°ree) + 1; igraph_vector_order1_int(°ree, &order, maxdegree); igraph_vector_int_init(&rank, no_of_nodes); IGRAPH_FINALLY(igraph_vector_int_destroy, &rank); for (i = 0; i < no_of_nodes; i++) { VECTOR(rank)[ VECTOR(order)[i] ] = no_of_nodes - i - 1; } IGRAPH_CHECK(igraph_adjlist_init(graph, &allneis, IGRAPH_ALL)); IGRAPH_FINALLY(igraph_adjlist_destroy, &allneis); IGRAPH_CHECK(igraph_i_trans4_al_simplify(&allneis, &rank)); neis = igraph_Calloc(no_of_nodes, long int); if (neis == 0) { IGRAPH_ERROR("undirected local transitivity failed", IGRAPH_ENOMEM); } IGRAPH_FINALLY(igraph_free, neis); #ifndef TRIANGLES IGRAPH_CHECK(igraph_vector_resize(res, no_of_nodes)); igraph_vector_null(res); #else igraph_vector_int_clear(res); #endif for (nn = no_of_nodes - 1; nn >= 0; nn--) { node = VECTOR(order)[nn]; IGRAPH_ALLOW_INTERRUPTION(); neis1 = igraph_adjlist_get(&allneis, node); neilen1 = igraph_vector_int_size(neis1); deg1 = (long int) VECTOR(degree)[node]; /* Mark the neighbors of the node */ for (i = 0; i < neilen1; i++) { neis[ (long int) VECTOR(*neis1)[i] ] = node + 1; } for (i = 0; i < neilen1; i++) { long int nei = (long int) VECTOR(*neis1)[i]; neis2 = igraph_adjlist_get(&allneis, nei); neilen2 = igraph_vector_int_size(neis2); for (j = 0; j < neilen2; j++) { long int nei2 = (long int) VECTOR(*neis2)[j]; if (neis[nei2] == node + 1) { #ifndef TRIANGLES VECTOR(*res)[nei2] += 1; VECTOR(*res)[nei] += 1; VECTOR(*res)[node] += 1; #else IGRAPH_CHECK(igraph_vector_int_push_back(res, node)); IGRAPH_CHECK(igraph_vector_int_push_back(res, nei)); IGRAPH_CHECK(igraph_vector_int_push_back(res, nei2)); #endif } } } #ifdef TRANSIT if (mode == IGRAPH_TRANSITIVITY_ZERO && deg1 < 2) { VECTOR(*res)[node] = 0.0; } else { VECTOR(*res)[node] = VECTOR(*res)[node] / deg1 / (deg1 - 1) * 2.0; } #endif #ifdef TRIEDGES VECTOR(*res)[node] += deg1; #endif } igraph_free(neis); igraph_adjlist_destroy(&allneis); igraph_vector_int_destroy(&rank); igraph_vector_destroy(°ree); igraph_vector_int_destroy(&order); IGRAPH_FINALLY_CLEAN(5);