name: heatitup-complete version: 0.5.4.1 synopsis: Find and annotate ITDs with assembly or read pair joining. description: Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. homepage: http://github.com/GregorySchwartz/heatitup-complete#readme license: GPL-3 license-file: LICENSE author: Gregory W. Schwartz maintainer: gsch@pennmedicine.upenn.edu copyright: Copyright: (c) 2019 Gregory W. Schwartz category: Bioinformatics build-type: Simple -- extra-source-files: cabal-version: >=1.10 library hs-source-dirs: src exposed-modules: Types , Utility , Parse , Merge , Blast build-depends: base >= 4.7 && < 5 , bytestring , cassava , containers , fasta , foldl , lens , safe , text , text-show , turtle , vector ghc-options: -O2 default-language: Haskell2010 executable heatitup-complete hs-source-dirs: app main-is: Main.hs ghc-options: -threaded -rtsopts -O2 build-depends: base , heatitup-complete , bytestring , cassava , containers , fasta , foldl , optparse-applicative , pipes , pipes-text , safe , text , turtle , vector default-language: Haskell2010 source-repository head type: git location: https://github.com/GregorySchwartz/heatitup-complete