cabal-version: 2.2 name: hyraxAbif version: 0.2.3.3 synopsis: Modules for parsing, generating and manipulating AB1 files. homepage: https://github.com/hyraxbio/hyraxAbif/#readme license: BSD-3-Clause license-file: LICENSE author: HyraxBio maintainer: andre@hyraxbio.co.za, andre@andrevdm.com copyright: 2018 HyraxBio category: Bioinformatics build-type: Simple extra-source-files: README.md extra-doc-files: docs/*.png , docs/docs/*.png description: This library provides functionality for parsing, modifying, writing and generating ABIF files <> . Any AB1 file conforming to the standard at should be supported. . This library also support generating a minimal ABIF file from a FASTA input sequence. . A basic terminal application that can dump and generate AB1s is included. See . See . * "Hyrax.Abif.Generate" for generate ABIF files from FASTA inputs * "Hyrax.Abif.Read" for parsing ABIF files * "Hyrax.Abif.Write" for creating/updating ABIF files * "Hyrax.Abif" for the core types * "Examples" for examples library ghc-options: -Wall -Wincomplete-uni-patterns -Wincomplete-record-updates -Wimplicit-prelude -Wcompat -Wredundant-constraints -Wnoncanonical-monad-instances hs-source-dirs: src exposed-modules: Hyrax.Abif , Hyrax.Abif.Read , Hyrax.Abif.Write , Hyrax.Abif.Generate , Hyrax.Abif.Fasta , Examples , Examples.AddComment , Examples.RemoveComments , Examples.ReadAb1 build-depends: base >= 4.9.1.0 && < 5 , protolude >= 0.2.2 && < 0.2.3 , text >= 1.2.3.0 && < 1.2.4.0 , bytestring >= 0.10.8.2 && < 0.10.9.0 , binary >= 0.8.5.1 && < 0.8.6.0 , directory >= 1.3.0.2 && < 1.3.2.0 , filepath >= 1.4.1.2 && < 1.4.2.0 default-language: Haskell2010 executable hyraxAbif-exe hs-source-dirs: app main-is: Main.hs ghc-options: -threaded -rtsopts -with-rtsopts=-N -Wall -Wincomplete-uni-patterns -Wincomplete-record-updates -Wimplicit-prelude -Wcompat -Wredundant-constraints -Wnoncanonical-monad-instances build-depends: base >= 4.9.1.0 && < 5 , hyraxAbif , protolude >= 0.2.2 && < 0.2.3 , text >= 1.2.3.0 && < 1.2.4.0 , bytestring >= 0.10.8.2 && < 0.10.9.0 , pretty-show >= 1.6.16 && < 1.7.0 , hscolour >= 1.24.4 && < 1.25.0 default-language: Haskell2010 test-suite hyraxAbif-test type: exitcode-stdio-1.0 hs-source-dirs: test main-is: Tests.hs build-depends: base >= 4.9.1.0 && < 5 , hyraxAbif , protolude >= 0.2.2 && < 0.2.3 , text >= 1.2.3.0 && < 1.2.4.0 , bytestring >= 0.10.8.2 && < 0.10.9.0 , binary >= 0.8.5.1 && < 0.8.6.0 , hedgehog >= 0.5.3 && < 0.6.2 other-modules: AbifTests , FastaTests , Generators ghc-options: -threaded -rtsopts -with-rtsopts=-N -Wall -Wincomplete-uni-patterns -Wincomplete-record-updates -Wimplicit-prelude -Wcompat -Wredundant-constraints -Wnoncanonical-monad-instances default-language: Haskell2010 source-repository head type: git location: https://github.com/hyraxbio/hyraxAbif