{-# LANGUAGE CPP #-} {-# LANGUAGE DeriveDataTypeable #-} {-# LANGUAGE DeriveGeneric #-} {-# LANGUAGE MultiParamTypeClasses #-} {-# LANGUAGE TypeFamilies #-} {-# LANGUAGE Trustworthy #-} -------------------------------------------------------------------- -- | -- Copyright : (c) Edward Kmett 2013-2015 -- License : BSD3 -- Maintainer: Edward Kmett -- Stability : experimental -- Portability: non-portable -- -------------------------------------------------------------------- module Numeric.Log ( Log(..) , sum ) where import Prelude hiding (maximum, sum) import Control.Comonad import Control.DeepSeq import Data.Binary as Binary import Data.Bytes.Serial import Data.Data import Data.Distributive import Data.Foldable as Foldable hiding (sum) import Data.Functor.Bind import Data.Functor.Classes import Data.Functor.Extend import Data.Hashable import Data.Hashable.Lifted import Data.Int import qualified Data.List as List import Data.List.NonEmpty (NonEmpty(..)) import Data.Semigroup import Data.Semigroup.Foldable import Data.Semigroup.Traversable import Data.Serialize as Serialize import qualified Data.Vector.Unboxed as U import Data.Vector.Unboxed (Unbox) import qualified Data.Vector.Generic as G import qualified Data.Vector.Generic.Mutable as M import Foreign.Ptr import Foreign.Storable import GHC.Generics import Numeric import Text.Read as T import Text.Show as T -- $setup -- >>> let Exp x ~= Exp y = abs ((exp x-exp y) / exp x) < 0.01 -- | @Log@-domain @Float@ and @Double@ values. newtype Log a = Exp { ln :: a } deriving (Eq,Ord,Data,Generic) instance (Floating a, Show a) => Show (Log a) where showsPrec d (Exp a) = T.showsPrec d (exp a) instance (Floating a, Read a) => Read (Log a) where readPrec = Exp . log <$> step T.readPrec instance Binary a => Binary (Log a) where put = Binary.put . ln {-# INLINE put #-} get = Exp <$> Binary.get {-# INLINE get #-} instance Serialize a => Serialize (Log a) where put = Serialize.put . ln {-# INLINE put #-} get = Exp <$> Serialize.get {-# INLINE get #-} instance Serial a => Serial (Log a) where serialize = serialize . ln deserialize = Exp <$> deserialize instance Serial1 Log where serializeWith f = f . ln deserializeWith m = Exp <$> m instance Functor Log where fmap f (Exp a) = Exp (f a) {-# INLINE fmap #-} instance Hashable a => Hashable (Log a) where hashWithSalt i (Exp a) = hashWithSalt i a {-# INLINE hashWithSalt #-} instance Hashable1 Log where liftHashWithSalt hws i (Exp a) = hws i a {-# INLINE liftHashWithSalt #-} instance Eq1 Log where liftEq eq (Exp a) (Exp b) = eq a b instance Storable a => Storable (Log a) where sizeOf = sizeOf . ln {-# INLINE sizeOf #-} alignment = alignment . ln {-# INLINE alignment #-} peek ptr = Exp <$> peek (castPtr ptr) {-# INLINE peek #-} poke ptr (Exp a) = poke (castPtr ptr) a {-# INLINE poke #-} instance NFData a => NFData (Log a) where rnf (Exp a) = rnf a {-# INLINE rnf #-} instance Foldable Log where foldMap f (Exp a) = f a {-# INLINE foldMap #-} instance Foldable1 Log where foldMap1 f (Exp a) = f a {-# INLINE foldMap1 #-} instance Traversable Log where traverse f (Exp a) = Exp <$> f a {-# INLINE traverse #-} instance Traversable1 Log where traverse1 f (Exp a) = Exp <$> f a {-# INLINE traverse1 #-} instance Distributive Log where distribute = Exp . fmap ln {-# INLINE distribute #-} instance Extend Log where extended f w@Exp{} = Exp (f w) {-# INLINE extended #-} instance Comonad Log where extract (Exp a) = a {-# INLINE extract #-} extend f w@Exp{} = Exp (f w) {-# INLINE extend #-} instance Applicative Log where pure = Exp {-# INLINE pure #-} Exp f <*> Exp a = Exp (f a) {-# INLINE (<*>) #-} instance ComonadApply Log where Exp f <@> Exp a = Exp (f a) {-# INLINE (<@>) #-} instance Apply Log where Exp f <.> Exp a = Exp (f a) {-# INLINE (<.>) #-} instance Bind Log where Exp a >>- f = f a {-# INLINE (>>-) #-} instance Monad Log where return = pure {-# INLINE return #-} Exp a >>= f = f a {-# INLINE (>>=) #-} instance (RealFloat a, Enum a) => Enum (Log a) where succ a = a + 1 {-# INLINE succ #-} pred a = a - 1 {-# INLINE pred #-} toEnum = fromIntegral {-# INLINE toEnum #-} fromEnum = round . exp . ln {-# INLINE fromEnum #-} enumFrom (Exp a) = [ Exp (log b) | b <- Prelude.enumFrom (exp a) ] {-# INLINE enumFrom #-} enumFromThen (Exp a) (Exp b) = [ Exp (log c) | c <- Prelude.enumFromThen (exp a) (exp b) ] {-# INLINE enumFromThen #-} enumFromTo (Exp a) (Exp b) = [ Exp (log c) | c <- Prelude.enumFromTo (exp a) (exp b) ] {-# INLINE enumFromTo #-} enumFromThenTo (Exp a) (Exp b) (Exp c) = [ Exp (log d) | d <- Prelude.enumFromThenTo (exp a) (exp b) (exp c) ] {-# INLINE enumFromThenTo #-} -- | Negative infinity negInf :: Fractional a => a negInf = -(1/0) {-# INLINE negInf #-} -- $LogNumTests -- -- Subtraction -- -- >>> (3 - 1 :: Log Double) ~= 2 -- True -- -- >>> 1 - 3 :: Log Double -- NaN -- -- >>> (3 - 2 :: Log Float) ~= 1 -- True -- -- >>> 1 - 3 :: Log Float -- NaN -- -- >>> Exp (1/0) - Exp (1/0) :: Log Double -- NaN -- -- >>> 0 - 0 :: Log Double -- 0.0 -- -- >>> 0 - Exp (1/0) :: Log Double -- NaN -- -- >>> Exp (1/0) - 0.0 :: Log Double -- Infinity -- -- Multiplication -- -- >>> (3 * 2 :: Log Double) ~= 6 -- True -- -- >>> 0 * Exp (1/0) :: Log Double -- NaN -- -- >>> Exp (1/0) * Exp (1/0) :: Log Double -- Infinity -- -- >>> 0 * 0 :: Log Double -- 0.0 -- -- >>> Exp (0/0) * 0 :: Log Double -- NaN -- -- >>> Exp (0/0) * Exp (1/0) :: Log Double -- NaN -- -- Addition -- -- >>> (3 + 1 :: Log Double) ~= 4 -- True -- -- >>> 0 + 0 :: Log Double -- 0.0 -- -- >>> Exp (1/0) + Exp (1/0) :: Log Double -- Infinity -- -- >>> Exp (1/0) + 0 :: Log Double -- Infinity -- -- Division -- -- >>> (3 / 2 :: Log Double) ~= 1.5 -- True -- -- >>> 3 / 0 :: Log Double -- Infinity -- -- >>> Exp (1/0) / 0 :: Log Double -- Infinity -- -- >>> 0 / Exp (1/0) :: Log Double -- 0.0 -- -- >>> Exp (1/0) / Exp (1/0) :: Log Double -- NaN -- -- >>> 0 / 0 :: Log Double -- NaN -- -- Negation -- -- >>> ((-3) + 8 :: Log Double) ~= 8 -- False -- -- >>> (-0) :: Log Double -- 0.0 -- -- >>> (-(0/0)) :: Log Double -- NaN -- -- Signum -- -- >>> signum 0 :: Log Double -- 0.0 -- -- >>> signum 3 :: Log Double -- 1.0 -- -- >>> signum (Exp (0/0)) :: Log Double -- NaN instance RealFloat a => Num (Log a) where Exp a * Exp b = Exp (a + b) {-# INLINE (*) #-} Exp a + Exp b | a == b && isInfinite a && isInfinite b = Exp a | a >= b = Exp (a + log1pexp (b - a)) | otherwise = Exp (b + log1pexp (a - b)) {-# INLINE (+) #-} Exp a - Exp b | isInfinite a && isInfinite b && a < 0 && b < 0 = Exp negInf | otherwise = Exp (a + log1mexp (b - a)) {-# INLINE (-) #-} signum a | a == 0 = Exp negInf -- 0 | a > 0 = Exp 0 -- 1 | otherwise = Exp (0/0) -- NaN {-# INLINE signum #-} negate (Exp a) | isInfinite a && a < 0 = Exp negInf | otherwise = Exp (0/0) {-# INLINE negate #-} abs = id {-# INLINE abs #-} fromInteger = Exp . log . fromInteger {-# INLINE fromInteger #-} instance RealFloat a => Fractional (Log a) where -- n/0 == infinity is handled seamlessly for us, as is 0/0 and infinity/infinity NaNs, and 0/infinity == 0. Exp a / Exp b = Exp (a-b) {-# INLINE (/) #-} fromRational = Exp . log . fromRational {-# INLINE fromRational #-} -- $LogProperFractionTests -- -- >>> (properFraction 3.5 :: (Integer, Log Double)) -- (3,0.5) -- -- >>> (properFraction 0.5 :: (Integer, Log Double)) -- (0,0.5) instance RealFloat a => RealFrac (Log a) where properFraction l | ln l < 0 = (0, l) | otherwise = (\(b,a) -> (b, Exp $ log a)) $ properFraction $ exp (ln l) newtype instance U.MVector s (Log a) = MV_Log (U.MVector s a) newtype instance U.Vector (Log a) = V_Log (U.Vector a) instance (RealFloat a, Unbox a) => Unbox (Log a) instance Unbox a => M.MVector U.MVector (Log a) where {-# INLINE basicLength #-} {-# INLINE basicUnsafeSlice #-} {-# INLINE basicOverlaps #-} {-# INLINE basicUnsafeNew #-} {-# INLINE basicUnsafeReplicate #-} {-# INLINE basicUnsafeRead #-} {-# INLINE basicUnsafeWrite #-} {-# INLINE basicClear #-} {-# INLINE basicInitialize #-} {-# INLINE basicSet #-} {-# INLINE basicUnsafeCopy #-} {-# INLINE basicUnsafeGrow #-} basicLength (MV_Log v) = M.basicLength v basicUnsafeSlice i n (MV_Log v) = MV_Log $ M.basicUnsafeSlice i n v basicOverlaps (MV_Log v1) (MV_Log v2) = M.basicOverlaps v1 v2 basicUnsafeNew n = MV_Log <$> M.basicUnsafeNew n basicUnsafeReplicate n (Exp x) = MV_Log <$> M.basicUnsafeReplicate n x basicUnsafeRead (MV_Log v) i = Exp <$> M.basicUnsafeRead v i basicUnsafeWrite (MV_Log v) i (Exp x) = M.basicUnsafeWrite v i x basicClear (MV_Log v) = M.basicClear v basicInitialize (MV_Log v) = M.basicInitialize v basicSet (MV_Log v) (Exp x) = M.basicSet v x basicUnsafeCopy (MV_Log v1) (MV_Log v2) = M.basicUnsafeCopy v1 v2 basicUnsafeGrow (MV_Log v) n = MV_Log <$> M.basicUnsafeGrow v n instance (RealFloat a, Unbox a) => G.Vector U.Vector (Log a) where {-# INLINE basicUnsafeFreeze #-} {-# INLINE basicUnsafeThaw #-} {-# INLINE basicLength #-} {-# INLINE basicUnsafeSlice #-} {-# INLINE basicUnsafeIndexM #-} {-# INLINE elemseq #-} basicUnsafeFreeze (MV_Log v) = V_Log <$> G.basicUnsafeFreeze v basicUnsafeThaw (V_Log v) = MV_Log <$> G.basicUnsafeThaw v basicLength (V_Log v) = G.basicLength v basicUnsafeSlice i n (V_Log v) = V_Log $ G.basicUnsafeSlice i n v basicUnsafeIndexM (V_Log v) i = Exp <$> G.basicUnsafeIndexM v i basicUnsafeCopy (MV_Log mv) (V_Log v) = G.basicUnsafeCopy mv v elemseq _ (Exp x) = G.elemseq (undefined :: U.Vector a) x instance (RealFloat a, Ord a) => Real (Log a) where toRational (Exp a) = toRational (exp a) {-# INLINE toRational #-} data Acc1 a = Acc1 {-# UNPACK #-} !Int64 !a instance RealFloat a => Semigroup (Log a) where (<>) = (+) {-# INLINE (<>) #-} sconcat (Exp z :| zs) = Exp $ case List.foldl' step1 (Acc1 0 z) zs of Acc1 nm1 a | isInfinite a -> a | otherwise -> a + log1p (List.foldl' (step2 a) 0 zs + fromIntegral nm1) where step1 (Acc1 n y) (Exp x) = Acc1 (n + 1) (max x y) step2 a r (Exp x) = r + expm1 (x - a) {-# INLINE sconcat #-} instance RealFloat a => Monoid (Log a) where mempty = Exp negInf {-# INLINE mempty #-} #if !(MIN_VERSION_base(4,11,0)) mappend = (<>) #endif mconcat [] = 0 mconcat (x:xs) = sconcat (x :| xs) logMap :: Floating a => (a -> a) -> Log a -> Log a logMap f = Exp . log . f . exp . ln {-# INLINE logMap #-} data Acc a = Acc {-# UNPACK #-} !Int64 !a | None -- | Efficiently and accurately compute the sum of a set of log-domain numbers -- -- While folding with @(+)@ accomplishes the same end, it requires an -- additional @n-2@ logarithms to sum @n@ terms. In addition, -- here we introduce fewer opportunities for round-off error. -- -- While for small quantities the naive sum accumulates error, -- -- >>> let xs = Prelude.replicate 40000 (Exp 1e-4) :: [Log Float] -- >>> Prelude.sum xs ~= 4.00e4 -- True -- -- This sum gives a more accurate result, -- -- >>> Numeric.Log.sum xs ~= 4.00e4 -- True -- -- /NB:/ This does require two passes over the data. sum :: (RealFloat a, Foldable f) => f (Log a) -> Log a sum xs = Exp $ case Foldable.foldl' step1 None xs of None -> negInf Acc nm1 a | isInfinite a -> a | otherwise -> a + log1p (Foldable.foldl' (step2 a) 0 xs + fromIntegral nm1) where step1 None (Exp x) = Acc 0 x step1 (Acc n y) (Exp x) = Acc (n + 1) (max x y) step2 a r (Exp x) = r + expm1 (x - a) {-# INLINE sum #-} instance RealFloat a => Floating (Log a) where pi = Exp (log pi) {-# INLINE pi #-} exp (Exp a) = Exp (exp a) {-# INLINE exp #-} log (Exp a) = Exp (log a) {-# INLINE log #-} Exp b ** Exp e = Exp (b * exp e) {-# INLINE (**) #-} sqrt (Exp a) = Exp (a / 2) {-# INLINE sqrt #-} logBase (Exp a) (Exp b) = Exp (log (logBase (exp a) (exp b))) {-# INLINE logBase #-} sin = logMap sin {-# INLINE sin #-} cos = logMap cos {-# INLINE cos #-} tan = logMap tan {-# INLINE tan #-} asin = logMap asin {-# INLINE asin #-} acos = logMap acos {-# INLINE acos #-} atan = logMap atan {-# INLINE atan #-} sinh = logMap sinh {-# INLINE sinh #-} cosh = logMap cosh {-# INLINE cosh #-} tanh = logMap tanh {-# INLINE tanh #-} asinh = logMap asinh {-# INLINE asinh #-} acosh = logMap acosh {-# INLINE acosh #-} atanh = logMap atanh {-# INLINE atanh #-} {-# RULES "realToFrac" realToFrac = Exp . realToFrac . ln :: Log Double -> Log Float "realToFrac" realToFrac = Exp . realToFrac . ln :: Log Float -> Log Double "realToFrac" realToFrac = exp . ln :: Log Double -> Double "realToFrac" realToFrac = exp . ln :: Log Float -> Float "realToFrac" realToFrac = Exp . log :: Double -> Log Double "realToFrac" realToFrac = Exp . log :: Float -> Log Float #-}