>$< | Mcmc.Monitor.Parameter, Mcmc.Monitor.ParameterBatch, Mcmc |
@~ | Mcmc.Proposal, Mcmc |
aAutoTune | Mcmc.Algorithm |
Acceptance | Mcmc.Acceptance |
AcceptanceCounts | |
1 (Type/Class) | Mcmc.Acceptance |
2 (Data Constructor) | Mcmc.Acceptance |
AcceptanceRate | Mcmc.Acceptance |
acceptanceRate | Mcmc.Acceptance |
AcceptanceRates | |
1 (Type/Class) | Mcmc.Acceptance |
2 (Data Constructor) | Mcmc.Acceptance |
acceptanceRates | Mcmc.Acceptance |
Acceptances | Mcmc.Acceptance |
acceptances | Mcmc.Chain.Chain |
aCleanAfterBurnIn | Mcmc.Algorithm |
aCloseMonitors | Mcmc.Algorithm |
aExecuteMonitors | Mcmc.Algorithm |
aIsInvalidState | Mcmc.Algorithm |
aIterate | Mcmc.Algorithm |
aIteration | Mcmc.Algorithm |
Algorithm | Mcmc.Algorithm |
AllProposals | Mcmc.Cycle |
AnalysisName | |
1 (Type/Class) | Mcmc.Settings, Mcmc |
2 (Data Constructor) | Mcmc.Settings, Mcmc |
aName | Mcmc.Algorithm |
aOpenMonitors | Mcmc.Algorithm |
aResetAcceptance | Mcmc.Algorithm |
aSave | Mcmc.Algorithm |
aStdMonitorHeader | Mcmc.Algorithm |
aSummarizeCycle | Mcmc.Algorithm |
autoTuneCycle | Mcmc.Cycle |
AuxiliaryTuningParameters | Mcmc.Proposal |
BatchSize | Mcmc.Monitor |
beta | Mcmc.Proposal.Simplex, Mcmc |
burnInIterations | Mcmc.Settings, Mcmc |
BurnInSettings | Mcmc.Settings, Mcmc |
BurnInWithAutoTuning | Mcmc.Settings, Mcmc |
BurnInWithCustomAutoTuning | Mcmc.Settings, Mcmc |
BurnInWithoutAutoTuning | Mcmc.Settings, Mcmc |
ccHasIntermediateTuners | Mcmc.Cycle |
ccProposals | Mcmc.Cycle |
ccRequireTrace | Mcmc.Cycle |
Chain | |
1 (Type/Class) | Mcmc.Chain.Chain |
2 (Data Constructor) | Mcmc.Chain.Chain |
closeEnvironment | Mcmc.Environment |
Continue | Mcmc.Settings, Mcmc |
createProposal | Mcmc.Proposal |
Cycle | Mcmc.Cycle, Mcmc |
cycle | Mcmc.Chain.Chain |
cycleFromList | Mcmc.Cycle, Mcmc |
Debug | Mcmc.Logger, Mcmc.Settings, Mcmc |
defaultHParams | Mcmc.Proposal.Hamiltonian.Hamiltonian, Mcmc |
defaultNParams | Mcmc.Proposal.Hamiltonian.Nuts, Mcmc |
Dimension | Mcmc.Statistics.Types, Mcmc |
dirichlet | Mcmc.Proposal.Simplex, Mcmc |
emptyA | Mcmc.Acceptance |
Environment | |
1 (Type/Class) | Mcmc.Environment |
2 (Data Constructor) | Mcmc.Environment |
ExecutionMode | Mcmc.Settings, Mcmc |
Exp | Mcmc |
exponential | Mcmc.Prior, Mcmc |
Fail | Mcmc.Settings, Mcmc |
FastProposals | Mcmc.Cycle |
ForceAccept | Mcmc.Proposal |
ForceReject | Mcmc.Proposal |
freezeT | Mcmc.Chain.Trace |
fromAcceptances | Mcmc.Acceptance |
fromAnalysisName | Mcmc.Settings, Mcmc |
fromIterations | Mcmc.Settings, Mcmc |
fromMHG | Mcmc.Algorithm.MHG, Mcmc |
fromNChains | Mcmc.Algorithm.MC3, Mcmc |
fromNPoints | Mcmc.MarginalLikelihood, Mcmc |
fromNSwaps | Mcmc.Algorithm.MC3, Mcmc |
fromPDescription | Mcmc.Proposal |
fromPName | Mcmc.Proposal, Mcmc |
fromPWeight | Mcmc.Proposal, Mcmc |
fromSavedChain | Mcmc.Chain.Save |
fromSavedChainUnsafe | Mcmc.Chain.Save |
fromSwapPeriod | Mcmc.Algorithm.MC3, Mcmc |
fromVectorT | Mcmc.Chain.Trace |
gamma | Mcmc.Prior, Mcmc |
gammaMeanOne | Mcmc.Prior, Mcmc |
gammaMeanVariance | Mcmc.Prior, Mcmc |
gammaMeanVarianceToShapeScale | Mcmc.Prior, Mcmc |
gammaShapeScaleToMeanVariance | Mcmc.Prior, Mcmc |
generator | Mcmc.Chain.Chain |
genericContinuous | Mcmc.Proposal.Generic |
genericDiscrete | Mcmc.Proposal.Generic |
getAnalysisName | Mcmc.Settings, Mcmc |
getExecutionMode | Mcmc.Settings, Mcmc |
getLock | Mcmc.Logger |
getLogHandles | Mcmc.Logger |
getLogMode | Mcmc.Logger |
getMonitorBatchSize | Mcmc.Monitor |
getOptimalRate | Mcmc.Proposal |
getStartingTime | Mcmc.Logger |
getVerbosity | Mcmc.Logger |
greaterThan | Mcmc.Prior, Mcmc |
hamiltonian | Mcmc.Proposal.Hamiltonian.Hamiltonian, Mcmc |
HasAnalysisName | Mcmc.Settings, Mcmc |
HasExecutionMode | Mcmc.Settings, Mcmc |
HasLock | Mcmc.Logger |
HasLogHandles | Mcmc.Logger |
HasLogMode | Mcmc.Logger |
HasStartingTime | Mcmc.Logger |
HasVerbosity | Mcmc.Logger |
headT | Mcmc.Chain.Trace |
hFromVectorWith | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
hJacobian | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
hLeapfrogScalingFactor | Mcmc.Proposal.Hamiltonian.Hamiltonian, Mcmc |
hLeapfrogSimulationLength | Mcmc.Proposal.Hamiltonian.Hamiltonian, Mcmc |
hLikelihood | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
hMasses | Mcmc.Proposal.Hamiltonian.Hamiltonian, Mcmc |
HNoTuneLeapfrog | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
HNoTuneMasses | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
HParams | |
1 (Type/Class) | Mcmc.Proposal.Hamiltonian.Hamiltonian, Mcmc |
2 (Data Constructor) | Mcmc.Proposal.Hamiltonian.Hamiltonian, Mcmc |
hPrior | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
hSample | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
HStructure | |
1 (Type/Class) | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
2 (Data Constructor) | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
HTarget | |
1 (Type/Class) | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
2 (Data Constructor) | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
hToVector | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
HTuneAllMasses | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
HTuneDiagonalMassesOnly | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
HTuneLeapfrog | |
1 (Type/Class) | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
2 (Data Constructor) | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
HTuneMasses | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
HTuningConf | |
1 (Type/Class) | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
2 (Data Constructor) | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
Info | Mcmc.Logger, Mcmc.Settings, Mcmc |
initializeEnvironment | Mcmc.Environment |
InitialState | Mcmc.Chain.Chain |
IntermediateTuningAllProposals | Mcmc.Proposal |
IntermediateTuningFastProposalsOnly | Mcmc.Proposal |
iteration | Mcmc.Chain.Chain |
IterationMode | Mcmc.Cycle |
Iterations | |
1 (Type/Class) | Mcmc.Settings, Mcmc |
2 (Data Constructor) | Mcmc.Settings, Mcmc |
Jacobian | Mcmc.Jacobian, Mcmc.Proposal, Mcmc |
JacobianFunction | Mcmc.Jacobian, Mcmc.Proposal, Mcmc |
JacobianFunctionG | Mcmc.Jacobian, Mcmc |
KernelRatio | Mcmc.Proposal |
LastTuningAllProposals | Mcmc.Proposal |
LastTuningFastProposalsOnly | Mcmc.Proposal |
LeapfrogScalingFactor | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
LeapfrogSimulationLength | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
LeapfrogTrajectoryLength | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
lessThan | Mcmc.Prior, Mcmc |
liftProposal | Mcmc.Proposal, Mcmc |
liftProposalWith | Mcmc.Proposal, Mcmc |
Likelihood | Mcmc.Likelihood, Mcmc |
likelihood | Mcmc.Chain.Link |
LikelihoodFunction | Mcmc.Likelihood, Mcmc |
likelihoodFunction | Mcmc.Chain.Chain |
LikelihoodFunctionG | Mcmc.Likelihood, Mcmc |
Link | |
1 (Type/Class) | Mcmc.Chain.Link |
2 (Data Constructor) | Mcmc.Chain.Link |
link | Mcmc.Chain.Chain |
ln | Mcmc |
Log | Mcmc |
logDebugB | Mcmc.Logger |
logDebugS | Mcmc.Logger |
logFactorialG | Mcmc.Internal.SpecFunctions |
LogFileOnly | Mcmc.Logger, Mcmc.Settings, Mcmc |
logGammaG | Mcmc.Internal.SpecFunctions |
Logger | Mcmc.Logger |
logHandles | Mcmc.Environment |
logInfoB | Mcmc.Logger |
logInfoEndTime | Mcmc.Logger |
logInfoHeader | Mcmc.Logger |
logInfoS | Mcmc.Logger |
logInfoStartingTime | Mcmc.Logger |
LogMode | Mcmc.Logger, Mcmc.Settings, Mcmc |
logNormal | Mcmc.Prior, Mcmc |
logOutB | Mcmc.Logger |
LogStdOutAndFile | Mcmc.Logger, Mcmc.Settings, Mcmc |
LogStdOutOnly | Mcmc.Logger, Mcmc.Settings, Mcmc |
logWarnB | Mcmc.Logger |
logWarnS | Mcmc.Logger |
LowerBoundary | Mcmc.Statistics.Types, Mcmc |
MarginalLikelihood | Mcmc.MarginalLikelihood, Mcmc |
marginalLikelihood | Mcmc.MarginalLikelihood, Mcmc |
Masses | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
mBatches | Mcmc.Monitor |
mbpFunc | Mcmc.Monitor.ParameterBatch, Mcmc |
mbpName | Mcmc.Monitor.ParameterBatch, Mcmc |
MC3 | |
1 (Type/Class) | Mcmc.Algorithm.MC3, Mcmc |
2 (Data Constructor) | Mcmc.Algorithm.MC3, Mcmc |
mc3 | Mcmc.Algorithm.MC3, Mcmc |
mc3Generator | Mcmc.Algorithm.MC3, Mcmc |
mc3Iteration | Mcmc.Algorithm.MC3, Mcmc |
mc3Load | Mcmc.Algorithm.MC3, Mcmc |
mc3MHGChains | Mcmc.Algorithm.MC3, Mcmc |
mc3NChains | Mcmc.Algorithm.MC3, Mcmc |
mc3NSwaps | Mcmc.Algorithm.MC3, Mcmc |
mc3ReciprocalTemperatures | Mcmc.Algorithm.MC3, Mcmc |
mc3Save | Mcmc.Algorithm.MC3, Mcmc |
MC3Settings | |
1 (Type/Class) | Mcmc.Algorithm.MC3, Mcmc |
2 (Data Constructor) | Mcmc.Algorithm.MC3, Mcmc |
mc3Settings | Mcmc.Algorithm.MC3, Mcmc |
mc3SwapAcceptances | Mcmc.Algorithm.MC3, Mcmc |
mc3SwapPeriod | Mcmc.Algorithm.MC3, Mcmc |
mClose | Mcmc.Monitor |
mcmc | Mcmc.Mcmc, Mcmc |
mcmcContinue | Mcmc.Mcmc, Mcmc |
Mean | Mcmc.Statistics.Types, Mcmc |
mExec | Mcmc.Monitor |
mFiles | Mcmc.Monitor |
MHG | |
1 (Type/Class) | Mcmc.Algorithm.MHG, Mcmc |
2 (Data Constructor) | Mcmc.Algorithm.MHG, Mcmc |
mhg | Mcmc.Algorithm.MHG, Mcmc |
mhgAccept | Mcmc.Algorithm.MHG, Mcmc |
MHGChains | Mcmc.Algorithm.MC3, Mcmc |
mhgLoad | Mcmc.Algorithm.MHG, Mcmc |
mhgLoadUnsafe | Mcmc.Algorithm.MHG, Mcmc |
MHGRatio | Mcmc.Algorithm.MHG, Mcmc |
mhgSave | Mcmc.Algorithm.MHG, Mcmc |
MLAlgorithm | Mcmc.MarginalLikelihood, Mcmc |
mlAlgorithm | Mcmc.MarginalLikelihood, Mcmc |
mlAnalysisName | Mcmc.MarginalLikelihood, Mcmc |
mlExecutionMode | Mcmc.MarginalLikelihood, Mcmc |
mlInitialBurnIn | Mcmc.MarginalLikelihood, Mcmc |
mlIterations | Mcmc.MarginalLikelihood, Mcmc |
mlLogMode | Mcmc.MarginalLikelihood, Mcmc |
mlNPoints | Mcmc.MarginalLikelihood, Mcmc |
mlPointBurnIn | Mcmc.MarginalLikelihood, Mcmc |
MLSettings | |
1 (Type/Class) | Mcmc.MarginalLikelihood, Mcmc |
2 (Data Constructor) | Mcmc.MarginalLikelihood, Mcmc |
mlVerbosity | Mcmc.MarginalLikelihood, Mcmc |
Momenta | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
Monitor | |
1 (Type/Class) | Mcmc.Monitor, Mcmc |
2 (Data Constructor) | Mcmc.Monitor, Mcmc |
monitor | Mcmc.Chain.Chain |
MonitorBatch | Mcmc.Monitor, Mcmc |
monitorBatch | Mcmc.Monitor, Mcmc |
monitorBatchMean | Mcmc.Monitor.ParameterBatch, Mcmc |
monitorBatchMeanF | Mcmc.Monitor.ParameterBatch, Mcmc |
monitorBatchMeanS | Mcmc.Monitor.ParameterBatch, Mcmc |
monitorDouble | Mcmc.Monitor.Parameter, Mcmc |
monitorDoubleF | Mcmc.Monitor.Parameter, Mcmc |
monitorDoubleS | Mcmc.Monitor.Parameter, Mcmc |
MonitorFile | Mcmc.Monitor, Mcmc |
monitorFile | Mcmc.Monitor, Mcmc |
monitorInt | Mcmc.Monitor.Parameter, Mcmc |
MonitorParameter | |
1 (Type/Class) | Mcmc.Monitor.Parameter, Mcmc |
2 (Data Constructor) | Mcmc.Monitor.Parameter, Mcmc |
MonitorParameterBatch | |
1 (Type/Class) | Mcmc.Monitor.ParameterBatch, Mcmc |
2 (Data Constructor) | Mcmc.Monitor.ParameterBatch, Mcmc |
MonitorStdOut | Mcmc.Monitor, Mcmc |
monitorStdOut | Mcmc.Monitor, Mcmc |
mOpen | Mcmc.Monitor |
mpFunc | Mcmc.Monitor.Parameter, Mcmc |
mpName | Mcmc.Monitor.Parameter, Mcmc |
msHeader | Mcmc.Monitor |
mStdOut | Mcmc.Monitor |
nAcceptanceRates | Mcmc.Acceptance |
nAccepted | Mcmc.Acceptance |
NChains | |
1 (Type/Class) | Mcmc.Algorithm.MC3, Mcmc |
2 (Data Constructor) | Mcmc.Algorithm.MC3, Mcmc |
negative | Mcmc.Prior, Mcmc |
nLeapfrogScalingFactor | Mcmc.Proposal.Hamiltonian.Nuts, Mcmc |
nMasses | Mcmc.Proposal.Hamiltonian.Nuts, Mcmc |
NoBurnIn | Mcmc.Settings, Mcmc |
noLikelihood | Mcmc.Likelihood, Mcmc |
noPrior | Mcmc.Prior, Mcmc |
normal | Mcmc.Prior, Mcmc |
NormalTuningAllProposals | Mcmc.Proposal |
NormalTuningFastProposalsOnly | Mcmc.Proposal |
NoSave | Mcmc.Settings, Mcmc |
NoTune | Mcmc.Proposal, Mcmc |
NParams | |
1 (Type/Class) | Mcmc.Proposal.Hamiltonian.Nuts, Mcmc |
2 (Data Constructor) | Mcmc.Proposal.Hamiltonian.Nuts, Mcmc |
NPoints | |
1 (Type/Class) | Mcmc.MarginalLikelihood, Mcmc |
2 (Data Constructor) | Mcmc.MarginalLikelihood, Mcmc |
nRejected | Mcmc.Acceptance |
NSwaps | |
1 (Type/Class) | Mcmc.Algorithm.MC3, Mcmc |
2 (Data Constructor) | Mcmc.Algorithm.MC3, Mcmc |
nuts | Mcmc.Proposal.Hamiltonian.Nuts, Mcmc |
openWithExecutionMode | Mcmc.Settings, Mcmc |
Order | Mcmc.Cycle, Mcmc |
outLock | Mcmc.Environment |
Overwrite | Mcmc.Settings, Mcmc |
Parallel | Mcmc.Settings, Mcmc |
ParallelizationMode | Mcmc.Settings, Mcmc |
PDescription | |
1 (Type/Class) | Mcmc.Proposal |
2 (Data Constructor) | Mcmc.Proposal |
PDimension | |
1 (Type/Class) | Mcmc.Proposal |
2 (Data Constructor) | Mcmc.Proposal |
PDimensionUnknown | Mcmc.Proposal |
Period | Mcmc.Monitor |
PFast | Mcmc.Proposal |
PFunction | Mcmc.Proposal |
PName | |
1 (Type/Class) | Mcmc.Proposal, Mcmc |
2 (Data Constructor) | Mcmc.Proposal, Mcmc |
poisson | Mcmc.Prior, Mcmc |
Positions | Mcmc.Proposal.Hamiltonian.Common, Mcmc |
positive | Mcmc.Prior, Mcmc |
Posterior | Mcmc.Posterior, Mcmc |
PosteriorFunction | Mcmc.Posterior, Mcmc |
PosteriorFunctionG | Mcmc.Posterior, Mcmc |
prDescription | Mcmc.Proposal |
prDimension | Mcmc.Proposal |
prepareProposals | Mcmc.Cycle |
PResult | Mcmc.Proposal |
prFunction | Mcmc.Proposal |
Prior | Mcmc.Prior, Mcmc |
prior | Mcmc.Chain.Link |
PriorFunction | Mcmc.Prior, Mcmc |
priorFunction | Mcmc.Chain.Chain |
PriorFunctionG | Mcmc.Prior, Mcmc |
prName | Mcmc.Proposal |
product' | Mcmc.Prior, Mcmc |
Proposal | |
1 (Type/Class) | Mcmc.Proposal, Mcmc |
2 (Data Constructor) | Mcmc.Proposal |
proposalHeader | Mcmc.Proposal |
Propose | Mcmc.Proposal |
prSpeed | Mcmc.Proposal |
prTuner | Mcmc.Proposal |
prWeight | Mcmc.Proposal |
PSlow | Mcmc.Proposal |
PSpecial | Mcmc.Proposal |
PSpeed | Mcmc.Proposal |
pushAccept | Mcmc.Acceptance |
pushReject | Mcmc.Acceptance |
pushT | Mcmc.Chain.Trace |
PWeight | Mcmc.Proposal, Mcmc |
pWeight | Mcmc.Proposal, Mcmc |
Quiet | Mcmc.Logger, Mcmc.Settings, Mcmc |
RandomO | Mcmc.Cycle, Mcmc |
RandomReversibleO | Mcmc.Cycle, Mcmc |
Rate | Mcmc.Statistics.Types, Mcmc |
ReciprocalTemperatures | Mcmc.Algorithm.MC3, Mcmc |
renderDuration | Mcmc.Monitor.Time |
renderDurationS | Mcmc.Monitor.Time |
renderLog | Mcmc.Monitor.Log |
renderTime | Mcmc.Monitor.Time |
replicateT | Mcmc.Chain.Trace |
resetA | Mcmc.Acceptance |
ResetAcceptance | Mcmc.Acceptance |
ResetEverything | Mcmc.Acceptance |
ResetExpectedRatesOnly | Mcmc.Acceptance |
sAnalysisName | Mcmc.Settings, Mcmc |
Save | Mcmc.Settings, Mcmc |
savedAcceptances | Mcmc.Chain.Save |
SavedChain | |
1 (Type/Class) | Mcmc.Chain.Save |
2 (Data Constructor) | Mcmc.Chain.Save |
savedIteration | Mcmc.Chain.Save |
savedLink | Mcmc.Chain.Save |
savedSeed | Mcmc.Chain.Save |
savedTrace | Mcmc.Chain.Save |
savedTuningParameters | Mcmc.Chain.Save |
SaveMode | Mcmc.Settings, Mcmc |
sBurnIn | Mcmc.Settings, Mcmc |
Scale | Mcmc.Statistics.Types, Mcmc |
scale | Mcmc.Proposal.Scale, Mcmc |
scaleBactrian | Mcmc.Proposal.Bactrian, Mcmc |
scaleContrarily | Mcmc.Proposal.Scale, Mcmc |
scaleUnbiased | Mcmc.Proposal.Scale, Mcmc |
Sequential | Mcmc.Settings, Mcmc |
SequentialO | Mcmc.Cycle, Mcmc |
SequentialReversibleO | Mcmc.Cycle, Mcmc |
setOrder | Mcmc.Cycle, Mcmc |
Settings | |
1 (Type/Class) | Mcmc.Settings, Mcmc |
2 (Data Constructor) | Mcmc.Settings, Mcmc |
settings | Mcmc.Environment |
settingsCheck | Mcmc.Settings, Mcmc |
settingsLoad | Mcmc.Settings, Mcmc |
settingsPrettyPrint | Mcmc.Settings, Mcmc |
settingsSave | Mcmc.Settings, Mcmc |
sExecutionMode | Mcmc.Settings, Mcmc |
Shape | Mcmc.Statistics.Types, Mcmc |
simpleMonitor | Mcmc.Monitor, Mcmc |
Simplex | Mcmc.Proposal.Simplex, Mcmc |
simplexFromVector | Mcmc.Proposal.Simplex, Mcmc |
simplexUniform | Mcmc.Proposal.Simplex, Mcmc |
sIterations | Mcmc.Settings, Mcmc |
Size | Mcmc.Statistics.Types, Mcmc |
slide | Mcmc.Proposal.Slide, Mcmc |
slideBactrian | Mcmc.Proposal.Bactrian, Mcmc |
slideContrarily | Mcmc.Proposal.Slide, Mcmc |
slideSymmetric | Mcmc.Proposal.Slide, Mcmc |
slideUniformSymmetric | Mcmc.Proposal.Slide, Mcmc |
sLogMode | Mcmc.Settings, Mcmc |
sParallelizationMode | Mcmc.Settings, Mcmc |
SpikeParameter | Mcmc.Proposal.Bactrian |
sSaveMode | Mcmc.Settings, Mcmc |
StandardDeviation | Mcmc.Statistics.Types, Mcmc |
start | Mcmc.Chain.Chain |
startingTime | Mcmc.Environment |
state | Mcmc.Chain.Link |
SteppingStoneSampling | Mcmc.MarginalLikelihood, Mcmc |
sTraceLength | Mcmc.Settings, Mcmc |
summarizeCycle | Mcmc.Cycle |
summarizeProposal | Mcmc.Proposal |
sVerbosity | Mcmc.Settings, Mcmc |
SwapPeriod | |
1 (Type/Class) | Mcmc.Algorithm.MC3, Mcmc |
2 (Data Constructor) | Mcmc.Algorithm.MC3, Mcmc |
takeT | Mcmc.Chain.Trace |
tAuxiliaryTuningParameters | Mcmc.Proposal |
tGetPFunction | Mcmc.Proposal |
thawT | Mcmc.Chain.Trace |
ThermodynamicIntegration | Mcmc.MarginalLikelihood, Mcmc |
toSavedChain | Mcmc.Chain.Save |
totalAcceptanceRate | Mcmc.Acceptance |
toVector | Mcmc.Proposal.Simplex, Mcmc |
Trace | Mcmc.Chain.Trace |
trace | Mcmc.Chain.Chain |
TraceAuto | Mcmc.Settings, Mcmc |
TraceLength | Mcmc.Settings, Mcmc |
TraceMinimum | Mcmc.Settings, Mcmc |
transformKeysA | Mcmc.Acceptance |
tRequireTrace | Mcmc.Proposal |
tSuitableForIntermediateTuning | Mcmc.Proposal |
tTuningFunction | Mcmc.Proposal |
tTuningParameter | Mcmc.Proposal |
Tune | |
1 (Type/Class) | Mcmc.Proposal, Mcmc |
2 (Data Constructor) | Mcmc.Proposal, Mcmc |
Tuner | |
1 (Type/Class) | Mcmc.Proposal |
2 (Data Constructor) | Mcmc.Proposal |
tuneWithTuningParameters | Mcmc.Proposal |
TuningFunction | Mcmc.Proposal |
tuningFunction | Mcmc.Proposal |
TuningParameter | Mcmc.Proposal |
tuningParameterMax | Mcmc.Proposal |
tuningParameterMin | Mcmc.Proposal |
TuningType | Mcmc.Proposal |
uniform | Mcmc.Prior, Mcmc |
UpperBoundary | Mcmc.Statistics.Types, Mcmc |
Variance | Mcmc.Statistics.Types, Mcmc |
Verbosity | Mcmc.Logger, Mcmc.Settings, Mcmc |
Warn | Mcmc.Logger, Mcmc.Settings, Mcmc |