| Safe Haskell | None |
|---|---|
| Language | Haskell98 |
Utility
- addLengthHeader :: FastaSequence -> FastaSequence
- addFillerGermlines :: [FastaSequence] -> CloneMap
- replaceChars :: Char -> Text -> Text -> Text
- getField :: Int -> FastaSequence -> Text
Documentation
addLengthHeader :: FastaSequence -> FastaSequence Source
Adds the length of a sequence to the header of that sequence
addFillerGermlines :: [FastaSequence] -> CloneMap Source
Adds filler germlines to normal fasta files
replaceChars :: Char -> Text -> Text -> Text Source
Replace characters in the first string with another in the second string if they are equal to a certain character and they aren't replaced with a gap.
getField :: Int -> FastaSequence -> Text Source
Get the field of a fasta sequence, 1 indexed split by "|"