Safe Haskell	None
Language	Haskell2010

Statistics.RankProduct

Synopsis

rankList :: Ord a => Sort -> [a] -> [Double]
rankProduct :: Sort -> [Entity] -> [RankProductEntity]
prerankProduct :: [RankEntity] -> [RankProductEntity]
rankProductPermutation :: Permutations -> Sort -> [Entity] -> IO [(RankProductEntity, PValue)]
namedRankProductPermutation :: Permutations -> Sort -> [NamedEntity] -> IO [(Name, RankProductEntity, PValue)]

Documentation

rankList :: Ord a => Sort -> [a] -> [Double] Source #

Rank transform a list.

rankProduct :: Sort -> [Entity] -> [RankProductEntity] Source #

Get the rank product of a list of Entity. Ascending ranks the lowest value as 1 while Descending ranks the highest value as 1.

prerankProduct :: [RankEntity] -> [RankProductEntity] Source #

Get the rank product of a pre-ranked data set [[ranked values for a gene in different data sets]].

rankProductPermutation :: Permutations -> Sort -> [Entity] -> IO [(RankProductEntity, PValue)] Source #

Get the rank product of a list of Entity as well as the permutation p-value. Ascending ranks the lowest value as 1 while Descending ranks the highest value as 1.

namedRankProductPermutation :: Permutations -> Sort -> [NamedEntity] -> IO [(Name, RankProductEntity, PValue)] Source #

Get the rank product of a list of NamedEntity as well as the permutation p-value, removing entities without all replicates. Ascending ranks the lowest value as 1 while Descending ranks the highest value as 1.