Name:           rbr
Version:        0.8.3
License:        GPL
License-File:   LICENSE
Stability:      Beta
Author:         Ketil Malde
Maintainer:     Ketil Malde <ketil@malde.org>
Category:       Bioinformatics
Synopsis:       Mask nucleotide (EST) sequences in Fasta format
Description:    RBR is a tool for masking EST sequences. It uses a
                statistical model to identify suspicious sequence parts,
                and masks them. The README has more details.
                .
                The Darcs repository is at <http://malde.org/~ketil/rbr>.
Homepage:       http://malde.org/~ketil/

Cabal-Version:  >= 1.2
Tested-With:    GHC==6.8.2
-- add fps for ghc-6.4.2
Build-Depends:  base, bio >= 0.3.1, QuickCheck, binary, bytestring, containers
Build-Type:     Simple

data-files:     idea.txt, README, TODO

Library
        Exposed-Modules:  RBR.Options, RBR.Util, RBR.Stats, RBR.FreqTable, RBR.TextFormat
        C-sources:        RBR/hooks.c
        Build-Depends:    base>3, containers, bio
        Extensions:
        Ghc-Options:      -Wall -funbox-strict-fields

Executable rbr
        Executable:     rbr
        Main-Is:        RBR/RBR.lhs
        build-depends:  bytestring
        Extensions:     CPP
        Ghc-Options:    -Wall -funbox-strict-fields

Executable mct
        Executable:     mct
        Main-Is:        RBR/MCT.lhs
        build-depends:  bytestring
        Extensions:      BangPatterns, FlexibleContexts
        Ghc-Options:    -Wall -funbox-strict-fields