The samtools package

[Tags: library, mit]

Binding to the C samtools library, which reads and writes SAM format alignments, both binary and tab- delimited text formats. It also supports rapid access to specific alignments in a sorted BAM file and access to sequences from indexed Fasta files.


Properties

Versions0.1, 0.1.1, 0.1.2, 0.1.3, 0.2, 0.2.0.1, 0.2.1, 0.2.1.1, 0.2.1.2
Dependenciesbase (>=4.2 && <5), bytestring, filepath, haskell98, process, seqloc, vector (>=0.7)
LicenseMIT
AuthorNicholas Ingolia
Maintainernick@ingolia.org
CategoryBioinformatics
Home pagehttp://www.ingolia-lab.org/software/samtools/
Executablessamtest
Upload dateWed Jun 8 14:45:27 UTC 2011
Uploaded byNicholasIngolia
Downloads470 total (55 in last 30 days)

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