Bio.SamTools.Iteratee

Documentation

enumInHandle :: InHandle -> Enumerator [Bam1] IO a

enumTam :: FilePath -> Enumerator [Bam1] IO a

enumTamWithIndex :: FilePath -> FilePath -> Enumerator [Bam1] IO a

enumBam :: FilePath -> Enumerator [Bam1] IO a

enumQuery :: Query -> Enumerator [Bam1] IO a

enumIndexRegion :: IdxHandle -> Int -> (Int64, Int64) -> Enumerator [Bam1] IO a

enumBamRegion :: FilePath -> ByteString -> (Int64, Int64) -> Enumerator [Bam1] IO a