seqloc-datafiles: Read and write BED and GTF format genome annotations
Read and write BED and GTF format genome annotations
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| tests | Build test program | Disabled |
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- seqloc-datafiles-0.4.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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| Versions [RSS] | 0.1, 0.1.1, 0.2, 0.2.1, 0.2.1.1, 0.2.2, 0.2.2.1, 0.2.2.2, 0.4, 0.4.2 |
|---|---|
| Dependencies | attoparsec (>=0.8.5), base (>=4.2 && <5), biocore (>=0.2), bytestring, cmdtheline, conduit, conduit-extra, filepath, hashable, iteratee (>=0.8.1), lifted-base (>=0.2.3), monads-tf, pretty, QuickCheck, random, resourcet, seqloc (>=0.6), transformers, transformers-base (>=0.4.3), unordered-containers, vector [details] |
| License | MIT |
| Author | Nick Ingolia |
| Maintainer | nick@ingolia.org |
| Category | Bioinformatics |
| Home page | http://www.ingolia-lab.org/seqloc-datafiles-tutorial.html |
| Source repo | head: git clone http://github.com/ingolia/seqloc(seqloc-datafiles) |
| Uploaded | by NicholasIngolia at 2014-11-24T08:49:43Z |
| Distributions | |
| Reverse Dependencies | 1 direct, 0 indirect [details] |
| Executables | genome-to-trx, test-bed, test-gtf, bed-subregion, gtf-introns, bed-to-gtf, gtf-to-bed |
| Downloads | 6817 total (21 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
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| Status | Docs available [build log] Last success reported on 2015-06-07 [all 1 reports] |