SequenceFormats.Bed

Documentation

data BedEntry

Constructors

BedEntry Chrom Int Int

Instances

Show BedEntry

Defined in SequenceFormats.Bed

Methods

showsPrec :: Int -> BedEntry -> ShowS

show :: BedEntry -> String

showList :: [BedEntry] -> ShowS

Eq BedEntry

Defined in SequenceFormats.Bed

Methods

(==) :: BedEntry -> BedEntry -> Bool

(/=) :: BedEntry -> BedEntry -> Bool

bedFileParser :: Parser BedEntry

readBedFile :: MonadSafe m => FilePath -> Producer BedEntry m ()

data IntervalStatus

Constructors

BedBehind

BedOn

BedAhead

filterThroughBed :: Monad m => Producer BedEntry m () -> (a -> (Chrom, Int)) -> Producer a m () -> Producer a m ()