sequenceTools-1.4.0.2: A package with tools for processing DNA sequencing data

Index

AllSitesSequenceTools.PileupCaller
CallSequenceTools.PileupCaller
callGenotypeFromPileupSequenceTools.PileupCaller
CallingModeSequenceTools.PileupCaller
callMajorityAlleleSequenceTools.PileupCaller
callRandomAlleleSequenceTools.PileupCaller
callRandomDiploidSequenceTools.PileupCaller
callToDosageSequenceTools.PileupCaller
cleanSSdamageAllSamplesSequenceTools.PileupCaller
DiploidCallSequenceTools.PileupCaller
dosageToEigenstratGenoSequenceTools.PileupCaller
filterTransitionsSequenceTools.PileupCaller
findMajorityAllelesSequenceTools.PileupCaller
freqSumToEigenstratSequenceTools.PileupCaller
HaploidCallSequenceTools.PileupCaller
MajorityCallingSequenceTools.PileupCaller
MissingCallSequenceTools.PileupCaller
RandomCallingSequenceTools.PileupCaller
RandomDiploidCallingSequenceTools.PileupCaller
sampleWithoutReplacementSequenceTools.Utils
SingleStrandModeSequenceTools.PileupCaller
SkipTransitionsSequenceTools.PileupCaller
TransitionsMissingSequenceTools.PileupCaller
TransitionsModeSequenceTools.PileupCaller
versionInfoOptSequenceTools.Utils
versionInfoTextSequenceTools.Utils