sgrep: Sgrep - grep Fasta files for sequences matching a regular expression

[ bioinformatics, program ] [ Propose Tags ]

This is a simple utility to extract sequences from Fasta files. It expects its first parameter to be a regular expression, and its second to be a Fasta-formatted file. It will then output all sequences matching the regexp to standard output.

Versions [RSS] [faq] 0.0
Dependencies base (>=3 && <5), bio, regex-compat [details]
License LicenseRef-GPL
Author Ketil Malde
Maintainer Ketil Malde <>
Category Bioinformatics
Home page
Uploaded by KetilMalde at 2010-09-13T13:37:05Z
Distributions NixOS:0.0
Executables sgrep
Downloads 968 total (4 in the last 30 days)
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Status Hackage Matrix CI
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