module Data.Datamining.Clustering.SOMInternal where
import qualified Data.Foldable as F (Foldable, foldr)
import Data.List (foldl', minimumBy)
import Data.Ord (comparing)
import qualified Math.Geometry.Grid as G (Grid(..))
import qualified Math.Geometry.GridMap as GM (GridMap(..))
import Data.Datamining.Pattern (Pattern(..))
import Data.Datamining.Clustering.Classifier(Classifier(..))
import GHC.Generics (Generic)
import Prelude hiding (lookup)
class LearningFunction f where
type LearningRate f
rate :: f -> Int -> Int -> (LearningRate f)
data DecayingGaussian a = DecayingGaussian a a a a Int
deriving (Eq, Show, Generic)
instance (Floating a, Fractional a, Num a) =>
LearningFunction (DecayingGaussian a) where
type LearningRate (DecayingGaussian a) = a
rate (DecayingGaussian r0 rf w0 wf tf) t d = r * exp ((d'*d')/(w*w))
where a = t'/tf'
r = r0 * ((rf/r0)**a)
w = w0 * ((wf/w0)**a)
t' = fromIntegral t
tf' = fromIntegral tf
d' = fromIntegral d
data StepFunction a = StepFunction a deriving (Eq, Show, Generic)
instance (Fractional a) => LearningFunction (StepFunction a) where
type LearningRate (StepFunction a) = a
rate (StepFunction r) _ d = if d == 0 then r else 0.0
data ConstantFunction a = ConstantFunction a deriving (Eq, Show, Generic)
instance (Fractional a) => LearningFunction (ConstantFunction a) where
type LearningRate (ConstantFunction a) = a
rate (ConstantFunction r) _ _ = r
data SOM f gm k p = SOM
{
sGridMap :: gm p,
sLearningFunction :: f,
sCounter :: Int
} deriving (Eq, Show, Generic)
instance (F.Foldable gm) => F.Foldable (SOM f gm k) where
foldr f x g = F.foldr f x (sGridMap g)
instance (G.Grid (gm p)) => G.Grid (SOM f gm k p) where
type Index (SOM f gm k p) = G.Index (gm p)
type Direction (SOM f gm k p) = G.Direction (gm p)
indices = G.indices . sGridMap
distance = G.distance . sGridMap
neighbours = G.neighbours . sGridMap
contains = G.contains . sGridMap
viewpoint = G.viewpoint . sGridMap
directionTo = G.directionTo . sGridMap
tileCount = G.tileCount . sGridMap
null = G.null . sGridMap
nonNull = G.nonNull . sGridMap
instance (F.Foldable gm, GM.GridMap gm p, G.Grid (GM.BaseGrid gm p)) => GM.GridMap (SOM f gm k) p where
type BaseGrid (SOM f gm k) p = GM.BaseGrid gm p
toGrid = GM.toGrid . sGridMap
toMap = GM.toMap . sGridMap
mapWithKey = error "Not implemented"
adjustWithKey f k s = s { sGridMap=gm' }
where gm = sGridMap s
gm' = GM.adjustWithKey f k gm
currentLearningFunction
:: (LearningFunction f, LearningRate f ~ Metric p)
=> SOM f gm k p -> (Int -> Metric p)
currentLearningFunction s = (rate . sLearningFunction $ s) (sCounter s)
toGridMap :: GM.GridMap gm p => SOM f gm k p -> gm p
toGridMap = sGridMap
adjustNode
:: (Pattern p, G.Grid g, k ~ G.Index g) =>
g -> (Int -> Metric p) -> p -> k -> k -> p -> p
adjustNode g f target bmu k = makeSimilar target (f d)
where d = G.distance g bmu k
trainNeighbourhood
:: (Pattern p, G.Grid (gm p), GM.GridMap gm p,
G.Index (GM.BaseGrid gm p) ~ G.Index (gm p), LearningFunction f,
LearningRate f ~ Metric p) =>
SOM f gm k p -> G.Index (gm p) -> p -> SOM f gm k p
trainNeighbourhood s bmu target = s { sGridMap=gm' }
where gm = sGridMap s
gm' = GM.mapWithKey (adjustNode gm f target bmu) gm
f = currentLearningFunction s
incrementCounter :: SOM f gm k p -> SOM f gm k p
incrementCounter s = setCounter (sCounter s + 1) s
counter :: SOM f gm k p -> Int
counter = sCounter
setCounter :: Int -> SOM f gm k p -> SOM f gm k p
setCounter k s = s { sCounter = k }
justTrain
:: (Ord (Metric p), Pattern p, G.Grid (gm p),
GM.GridMap gm (Metric p), GM.GridMap gm p,
G.Index (GM.BaseGrid gm (Metric p)) ~ G.Index (gm p),
G.Index (GM.BaseGrid gm p) ~ G.Index (gm p), LearningFunction f,
LearningRate f ~ Metric p) =>
SOM f gm k p -> p -> SOM f gm k p
justTrain s p = trainNeighbourhood s bmu p
where ds = GM.toList . GM.map (p `difference`) . sGridMap $ s
bmu = fst . minimumBy (comparing snd) $ ds
instance
(GM.GridMap gm p, k ~ G.Index (GM.BaseGrid gm p), Pattern p,
G.Grid (gm p), GM.GridMap gm (Metric p), k ~ G.Index (gm p),
k ~ G.Index (GM.BaseGrid gm (Metric p)), Ord (Metric p),
LearningFunction f, LearningRate f ~ Metric p) =>
Classifier (SOM f gm) k p where
toList = GM.toList . sGridMap
numModels = G.tileCount . sGridMap
models = GM.elems . sGridMap
differences s p = GM.toList . GM.map (p `difference`) . sGridMap $ s
trainBatch s = incrementCounter . foldl' justTrain s
reportAndTrain s p = (bmu, ds, incrementCounter s')
where ds = differences s p
bmu = fst . minimumBy (comparing snd) $ ds
s' = trainNeighbourhood s bmu p