BWT | |
1 (Type/Class) | Data.BWT.Internal |
2 (Data Constructor) | Data.BWT.Internal |
BWTMatrix | |
1 (Type/Class) | Data.BWT.Internal |
2 (Data Constructor) | Data.BWT.Internal |
BWTSeq | Data.BWT.Internal |
bytestringBWTFromFMIndexB | Data.FMIndex |
bytestringBWTFromFMIndexT | Data.FMIndex |
bytestringBWTFromMTFB | Data.MTF |
bytestringBWTFromMTFT | Data.MTF |
bytestringBWTFromRLEB | Data.RLE |
bytestringBWTFromRLET | Data.RLE |
bytestringBWTToFMIndexB | Data.FMIndex |
bytestringBWTToFMIndexT | Data.FMIndex |
bytestringBWTToMTFB | Data.MTF |
bytestringBWTToMTFT | Data.MTF |
bytestringBWTToRLEB | Data.RLE |
bytestringBWTToRLET | Data.RLE |
bytestringFromBWTFromFMIndexB | Data.FMIndex |
bytestringFromBWTFromFMIndexT | Data.FMIndex |
bytestringFromBWTFromMTFB | Data.MTF |
bytestringFromBWTFromMTFT | Data.MTF |
bytestringFromBWTFromRLEB | Data.RLE |
bytestringFromBWTFromRLET | Data.RLE |
bytestringFromByteStringBWT | Data.BWT |
bytestringFromFMIndexB | Data.FMIndex |
bytestringFromFMIndexT | Data.FMIndex |
bytestringFromMTFB | Data.MTF |
bytestringFromMTFT | Data.MTF |
bytestringFromRLEB | Data.RLE |
bytestringFromRLET | Data.RLE |
bytestringFromWord8BWT | Data.BWT |
bytestringToBWT | Data.BWT |
bytestringToBWTToFMIndexB | Data.FMIndex |
bytestringToBWTToFMIndexT | Data.FMIndex |
bytestringToBWTToMTFB | Data.MTF |
bytestringToBWTToMTFT | Data.MTF |
bytestringToBWTToRLEB | Data.RLE |
bytestringToBWTToRLET | Data.RLE |
bytestringToFMIndexB | Data.FMIndex |
bytestringToFMIndexT | Data.FMIndex |
bytestringToMTFB | Data.MTF |
bytestringToMTFT | Data.MTF |
bytestringToRLEB | Data.RLE |
bytestringToRLET | Data.RLE |
createBWTMatrix | Data.BWT.Internal |
createSuffixArray | Data.BWT.Internal |
emptyFSTMTFILB | Data.MTF.Internal |
emptyFSTMTFILT | Data.MTF.Internal |
emptyFSTMTFSeqB | Data.MTF.Internal |
emptyFSTMTFSeqT | Data.MTF.Internal |
emptyFSTRLESeqB | Data.RLE.Internal |
emptyFSTRLESeqT | Data.RLE.Internal |
emptySTBWTCounter | Data.BWT.Internal |
emptySTBWTSeq | Data.BWT.Internal |
emptySTFMIndexCounterB | Data.FMIndex.Internal |
emptySTFMIndexCounterT | Data.FMIndex.Internal |
emptySTFMIndexILB | Data.FMIndex.Internal |
emptySTFMIndexILT | Data.FMIndex.Internal |
emptySTFMIndexSeqB | Data.FMIndex.Internal |
emptySTFMIndexSeqT | Data.FMIndex.Internal |
emptySTMTFCounterB | Data.MTF.Internal |
emptySTMTFCounterT | Data.MTF.Internal |
emptySTMTFILB | Data.MTF.Internal |
emptySTMTFILT | Data.MTF.Internal |
emptySTMTFLSSeqB | Data.MTF.Internal |
emptySTMTFLSSeqT | Data.MTF.Internal |
emptySTRLECounterB | Data.RLE.Internal |
emptySTRLECounterT | Data.RLE.Internal |
emptySTRLESeqB | Data.RLE.Internal |
emptySTRLESeqT | Data.RLE.Internal |
emptySTRLETempB | Data.RLE.Internal |
emptySTRLETempT | Data.RLE.Internal |
FFMIndexSeqB | Data.FMIndex.Internal |
FFMIndexSeqT | Data.FMIndex.Internal |
FMIndexB | |
1 (Type/Class) | Data.FMIndex.Internal |
2 (Data Constructor) | Data.FMIndex.Internal |
FMIndexSeqB | Data.FMIndex.Internal |
FMIndexSeqT | Data.FMIndex.Internal |
FMIndexT | |
1 (Type/Class) | Data.FMIndex.Internal |
2 (Data Constructor) | Data.FMIndex.Internal |
FMTFSeqB | Data.MTF.Internal |
FMTFSeqT | Data.MTF.Internal |
FRLESeqB | Data.RLE.Internal |
FRLESeqT | Data.RLE.Internal |
fromBWT | Data.BWT |
FSTMTFILB | Data.MTF.Internal |
FSTMTFILT | Data.MTF.Internal |
FSTMTFSeqB | Data.MTF.Internal |
FSTMTFSeqT | Data.MTF.Internal |
FSTRLESeqB | Data.RLE.Internal |
FSTRLESeqT | Data.RLE.Internal |
initializeSTMTFLSSeqB | Data.MTF.Internal |
initializeSTMTFLSSeqT | Data.MTF.Internal |
loadFSTMTFILB | Data.MTF.Internal |
loadFSTMTFILT | Data.MTF.Internal |
loadSTFMIndexILB | Data.FMIndex.Internal |
loadSTFMIndexILT | Data.FMIndex.Internal |
loadSTMTFILB | Data.MTF.Internal |
loadSTMTFILT | Data.MTF.Internal |
magicInverseBWT | Data.BWT.Internal |
MTFB | |
1 (Type/Class) | Data.MTF.Internal |
2 (Data Constructor) | Data.MTF.Internal |
MTFLSSeqB | Data.MTF.Internal |
MTFLSSeqT | Data.MTF.Internal |
MTFT | |
1 (Type/Class) | Data.MTF.Internal |
2 (Data Constructor) | Data.MTF.Internal |
nubSeq' | Data.MTF.Internal |
PBFMIndexSeqB | Data.FMIndex.Internal |
PBMTFSeqB | Data.MTF.Internal |
PTFMIndexSeqT | Data.FMIndex.Internal |
PTMTFSeqT | Data.MTF.Internal |
pushFSTRLESeqB | Data.RLE.Internal |
pushFSTRLESeqT | Data.RLE.Internal |
pushSTBWTSeq | Data.BWT.Internal |
pushSTRLESeqB | Data.RLE.Internal |
pushSTRLESeqT | Data.RLE.Internal |
RLEB | |
1 (Type/Class) | Data.RLE.Internal |
2 (Data Constructor) | Data.RLE.Internal |
RLESeqB | Data.RLE.Internal |
RLESeqT | Data.RLE.Internal |
RLET | |
1 (Type/Class) | Data.RLE.Internal |
2 (Data Constructor) | Data.RLE.Internal |
saToBWT | Data.BWT.Internal |
seqFromFMIndexB | Data.FMIndex.Internal |
seqFromFMIndexT | Data.FMIndex.Internal |
seqFromMTFB | Data.MTF.Internal |
seqFromMTFT | Data.MTF.Internal |
seqFromRLEB | Data.RLE.Internal |
seqFromRLET | Data.RLE.Internal |
seqToFMIndexB | Data.FMIndex.Internal |
seqToFMIndexT | Data.FMIndex.Internal |
seqToMTFB | Data.MTF.Internal |
seqToMTFT | Data.MTF.Internal |
seqToRLEB | Data.RLE.Internal |
seqToRLET | Data.RLE.Internal |
sortTB | Data.BWT.Internal |
STBWTCounter | Data.BWT.Internal |
STBWTSeq | Data.BWT.Internal |
STFMIndexCounterB | Data.FMIndex.Internal |
STFMIndexCounterT | Data.FMIndex.Internal |
STFMIndexILB | Data.FMIndex.Internal |
STFMIndexILT | Data.FMIndex.Internal |
STFMIndexSeqB | Data.FMIndex.Internal |
STFMIndexSeqT | Data.FMIndex.Internal |
STMTFCounterB | Data.MTF.Internal |
STMTFCounterT | Data.MTF.Internal |
STMTFILB | Data.MTF.Internal |
STMTFILT | Data.MTF.Internal |
STMTFLSSeqB | Data.MTF.Internal |
STMTFLSSeqT | Data.MTF.Internal |
STRLECounterB | Data.RLE.Internal |
STRLECounterT | Data.RLE.Internal |
STRLESeqB | Data.RLE.Internal |
STRLESeqT | Data.RLE.Internal |
STRLETempB | Data.RLE.Internal |
STRLETempT | Data.RLE.Internal |
Suffix | |
1 (Type/Class) | Data.BWT.Internal |
2 (Data Constructor) | Data.BWT.Internal |
suffix | Data.BWT.Internal |
SuffixArray | Data.BWT.Internal |
suffixindex | Data.BWT.Internal |
suffixstartpos | Data.BWT.Internal |
TextBWT | |
1 (Type/Class) | Data.BWT |
2 (Data Constructor) | Data.BWT |
textBWTFromFMIndexB | Data.FMIndex |
textBWTFromFMIndexT | Data.FMIndex |
textBWTFromMTFB | Data.MTF |
textBWTFromMTFT | Data.MTF |
textBWTFromRLEB | Data.RLE |
textBWTFromRLET | Data.RLE |
textBWTToFMIndexB | Data.FMIndex |
textBWTToFMIndexT | Data.FMIndex |
textBWTToMTFB | Data.MTF |
textBWTToMTFT | Data.MTF |
textBWTToRLEB | Data.RLE |
textBWTToRLET | Data.RLE |
textFromBWT | Data.BWT |
textFromBWTFromFMIndexB | Data.FMIndex |
textFromBWTFromFMIndexT | Data.FMIndex |
textFromBWTFromMTFB | Data.MTF |
textFromBWTFromMTFT | Data.MTF |
textFromBWTFromRLEB | Data.RLE |
textFromBWTFromRLET | Data.RLE |
textFromFMIndexB | Data.FMIndex |
textFromFMIndexT | Data.FMIndex |
textFromMTFB | Data.MTF |
textFromMTFT | Data.MTF |
textFromRLEB | Data.RLE |
textFromRLET | Data.RLE |
textToBWT | Data.BWT |
textToBWTToFMIndexB | Data.FMIndex |
textToBWTToFMIndexT | Data.FMIndex |
textToBWTToMTFB | Data.MTF |
textToBWTToMTFT | Data.MTF |
textToBWTToRLEB | Data.RLE |
textToBWTToRLET | Data.RLE |
textToFMIndexB | Data.FMIndex |
textToFMIndexT | Data.FMIndex |
textToMTFB | Data.MTF |
textToMTFT | Data.MTF |
textToRLEB | Data.RLE |
textToRLET | Data.RLE |
toBWT | Data.BWT |
updateFSTMTFILB | Data.MTF.Internal |
updateFSTMTFILT | Data.MTF.Internal |
updateFSTMTFSeqB | Data.MTF.Internal |
updateFSTMTFSeqT | Data.MTF.Internal |
updateSTBWTCounter | Data.BWT.Internal |
updateSTFMIndexCounterB | Data.FMIndex.Internal |
updateSTFMIndexCounterT | Data.FMIndex.Internal |
updateSTFMIndexSeqAB | Data.FMIndex.Internal |
updateSTFMIndexSeqAT | Data.FMIndex.Internal |
updateSTFMIndexSeqBB | Data.FMIndex.Internal |
updateSTFMIndexSeqBT | Data.FMIndex.Internal |
updateSTMTFCounterB | Data.MTF.Internal |
updateSTMTFCounterT | Data.MTF.Internal |
updateSTMTFLSSeqB | Data.MTF.Internal |
updateSTMTFLSSeqT | Data.MTF.Internal |
updateSTRLECounterB | Data.RLE.Internal |
updateSTRLECounterT | Data.RLE.Internal |
updateSTRLETempB | Data.RLE.Internal |
updateSTRLETempT | Data.RLE.Internal |