tlynx-0.6.0.0: Handle phylogenetic trees
Copyright(c) Dominik Schrempf 2021
LicenseGPL-3.0-or-later
Maintainerdominik.schrempf@gmail.com
Stabilityunstable
Portabilityportable
Safe HaskellNone
LanguageHaskell2010

TLynx.Shuffle.Shuffle

Description

Creation date: Thu Sep 19 15:01:52 2019.

The coalescent times are unaffected. The topology and the leaf order is shuffled. Branch support values are ignored and lost.

Synopsis

Documentation

shuffleCmd :: ELynx ShuffleArguments () Source #

Shuffle a tree. Get all coalescent times, shuffle them. Get all leaves, shuffle them. Connect the shuffled leaves with the shuffled coalescent times. The shuffled tree has a new topology while keeping the same set of coalescent times and leaves.