zsyntax-0.2.0.0: Automated theorem prover for the Zsyntax biochemical calculus

Index

::: 
1 (Type/Class)Zsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
2 (Data Constructor)Zsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
AZsyntax.Labelled.Formula
actZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
ActCaseZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
activateOtter.Internal.Structures
ActiveOtter.Internal.Structures
ActiveNodeOtter.Internal.Structures
ActiveNodesOtter.Internal.Structures
addInactiveOtter.Internal.Search
addRuleOtter.Internal.Search
addToInactivesOtter.Internal.Structures
AllResultsOtter.SearchRes, Otter, Zsyntax
AnnLSequentZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
applyOtter.Rule, Otter
arrowDimapOtter.Rule, Otter
AtomZsyntax.Labelled.Formula
atomZsyntax.Formula, Zsyntax
axForgetZsyntax.Formula, Zsyntax
Axiom 
1 (Type/Class)Zsyntax.Formula, Zsyntax
2 (Data Constructor)Zsyntax.Formula, Zsyntax
axiomZsyntax.Formula, Zsyntax
axiom'Zsyntax.Formula, Zsyntax
axLabelZsyntax.Labelled.Formula
axToFormulaZsyntax.Labelled.Formula
BAtomZsyntax.Labelled.Formula
bAtomZsyntax.Labelled.Formula
BConjZsyntax.Labelled.Formula
bConjZsyntax.Labelled.Formula
BFormulaZsyntax.Labelled.Formula
bfToAtomsZsyntax.Labelled.Formula
bfToFormulaZsyntax.Labelled.Formula
BioAtomZsyntax.Formula, Zsyntax
BioFormulaZsyntax.Formula, Zsyntax
BioInterZsyntax.Formula, Zsyntax
BipoleRelZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
BipoleRuleZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
BSCheckedOtter.Internal.Structures
BSCheckedNodeOtter.Internal.Structures
ConclOtter.Internal.Structures
conclZsyntax.Labelled.DerivationTerm
ConclNodeOtter.Internal.Structures
ConjZsyntax.Labelled.Formula
conjZsyntax.Formula, Zsyntax
ConjLZsyntax.Labelled.DerivationTerm
ConjRZsyntax.Labelled.DerivationTerm
consOtter.SearchRes, Otter
CopyZsyntax.Labelled.DerivationTerm
copyRuleZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
CSZsyntax.ReactionList
CSCZsyntax.ReactionList
CtrlSetZsyntax.ReactionList
CtrlSetCtxtZsyntax.ReactionList
CtrlTypeZsyntax.ReactionList
decideNeutralZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
DecoratedFormulaZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
DecoratedLSequentZsyntax
deepHetCompZsyntax.Labelled.Formula
DelayOtter.SearchRes, Otter
delayOtter.SearchRes, Otter
DerivationTermZsyntax.Labelled.DerivationTerm
dfLabelZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
doSearchOtter.Internal.Search
DTFocMatchResZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
DTMatchResZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
ElemBase 
1 (Type/Class)Zsyntax.Labelled.Formula
2 (Data Constructor)Zsyntax.Labelled.Formula
elemBaseZsyntax.Labelled.Formula
elemBaseAllZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
emptyActivesOtter.Internal.Structures
emptyGIOtter.Internal.Structures
emptyInactivesOtter.Internal.Structures
EmptyXiFullResultZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
EmptyZetaXiZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
extendZsyntax.ReactionList
ExtractionOtter.SearchRes, Otter, Zsyntax
extractNodeOtter.Internal.Structures
extractResultsOtter.SearchRes, Otter, Zsyntax
FailureReasonOtter.SearchRes, Otter, Zsyntax
filterImplZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
filterUnsubsumedOtter.Internal.Search
FKindZsyntax.Labelled.Formula
focZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
FocMatchResZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
focusZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
foldActivesOtter.Internal.Structures
Formula 
1 (Type/Class)Zsyntax.Formula, Zsyntax
2 (Data Constructor)Zsyntax.Formula, Zsyntax
frmlHetEqZsyntax.Labelled.Formula
frmlHetOrdZsyntax.Labelled.Formula
frNegZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
fromCSCtxtsZsyntax.ReactionList
frontierZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
frPosZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
FSCheckedOtter.Internal.Structures
FSCheckedNodeOtter.Internal.Structures
FullXiEmptyResultZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
FullZetaXiZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
fwdSubsumesOtter.Internal.Structures
generateRuleZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
getActivesOtter.Internal.Search
getRulesOtter.Internal.Search
GlIndexOtter.Internal.Structures
GlobalIndexOtter.Internal.Structures
GNSZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
GoalOtter.Internal.Structures
GoalNSequentZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
haveGoalOtter.Internal.Search
ImplZsyntax.Labelled.Formula
implZsyntax.Formula, Zsyntax
ImplLZsyntax.Labelled.DerivationTerm
implLeftZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
ImplRZsyntax.Labelled.DerivationTerm
implRightZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
InactiveOtter.Internal.Structures
InactiveNodeOtter.Internal.Structures
InactiveNodesOtter.Internal.Structures
InitZsyntax.Labelled.DerivationTerm
InitialOtter.Internal.Structures
initializeOtter.Internal.Structures
initialRulesZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
initIsBSCheckdOtter.Internal.Structures
initIsFSCheckdOtter.Internal.Structures
IsFocusableZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
isGoalMOtter.Internal.Search
isNotFwdSubsumedOtter.Internal.Search
justCSZsyntax.ReactionList
KAtomZsyntax.Labelled.Formula
KConjZsyntax.Labelled.Formula
KImplZsyntax.Labelled.Formula
LZsyntax.Labelled.Formula
Label 
1 (Type/Class)Zsyntax.Labelled.Formula
2 (Type/Class)Zsyntax
labelZsyntax.Labelled.Formula
LAxZsyntax.Labelled.Formula
LAxiomZsyntax.Labelled.Formula
lcBaseZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
LCtxtZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
leftActiveZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
LFormulaZsyntax.Labelled.Formula
LinNegZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
LinPosZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
loopOtter.Internal.Search
LSZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
lsConclZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
lsCtyZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
LSequentZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
lsLCtxtZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
lsUCtxtZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
lToSZsyntax.Formula, Zsyntax
matchOtter.Rule, Otter
matchLinearCtxtZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
matchMultiSetZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
matchRelZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
MatchResZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
matchSchemaZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
maybeBFormulaZsyntax.Labelled.Formula
maybeNeutralZsyntax.Formula, Zsyntax
mayProperRuleZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
maySequentZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
mergeOtter.Internal.Search
mkGoalOtter.Internal.Structures
MREmptyGoalZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
MRFullGoalZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
msRespectsCSZsyntax.ReactionList
NZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
NeutralZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
neutralizeZsyntax.Formula, Zsyntax
neutralizeFormulaZsyntax.Formula, Zsyntax
neutralizeOsZsyntax.Formula, Zsyntax
NeutralKindZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
NoResultsOtter.SearchRes, Otter, Zsyntax
normalizeZsyntax.Formula, Zsyntax
NotATheoremOtter.SearchRes, Otter, Zsyntax
nuLabelZsyntax.Formula, Zsyntax
OZsyntax.Labelled.Formula
oConjZsyntax.Labelled.Formula
oImplZsyntax.Labelled.Formula
OpaqueZsyntax.Labelled.Formula
percolateOtter.Internal.Search
popInactiveOtter.Internal.Search
popInactiveOpOtter.Internal.Structures
positiveFocalDispatchZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
ppBioFormulaZsyntax.Formula, Zsyntax
ppFormulaZsyntax.Formula, Zsyntax
ppLAxiomZsyntax.Labelled.Formula
ppLFormulaZsyntax.Labelled.Formula
processNewActiveOtter.Internal.Search
ProperRule 
1 (Type/Class)Otter.Rule, Otter
2 (Type/Class)Zsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
ProverOtter.Internal.Search
ProverStateOtter.Internal.Search
PSOtter.Internal.Search
ReactionListZsyntax.Labelled.Formula
RegularZsyntax.ReactionList
relDimapOtter.Rule, Otter
removeSubsumedByOtter.Internal.Search
removeSubsumedByOpOtter.Internal.Structures
Res 
1 (Type/Class)Otter.SearchRes, Otter
2 (Data Constructor)Otter.SearchRes, Otter
respectsZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
respectsCCZsyntax.ReactionList
respectsRListZsyntax.ReactionList
RLZsyntax.ReactionList
RListZsyntax.ReactionList
Rule 
1 (Type/Class)Otter.Rule, Otter
2 (Data Constructor)Otter.Rule, Otter
RuleAppResOtter.Internal.Search
SCZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
SchemaLCtxtZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
search 
1 (Function)Otter.Internal.Search, Otter
2 (Function)Zsyntax
searchLabelledZsyntax
SearchNodeOtter.Internal.Structures
SearchProperRuleOtter.Internal.Structures
SearchResOtter.SearchRes, Otter, Zsyntax
SearchRuleOtter.Internal.Structures
SequentZsyntax.Formula, Zsyntax
SLCZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
SpaceTooBigOtter.SearchRes, Otter, Zsyntax
SQZsyntax.Formula, Zsyntax
SSchemaZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
SSEmptyGoalZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
SSFullGoalZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
StageOtter.Internal.Structures
SubCtxtZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
subCtxtOfZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
SubsumableOtter.Internal.Structures, Otter
subsumesOtter.Internal.Structures, Otter
SupersetClosedZsyntax.ReactionList
switchNZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
toCtxtListZsyntax.ReactionList
toGoalSequentZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
toLabelledGoalZsyntax
toProperRuleOtter.Internal.Structures
transitionsZsyntax.Labelled.DerivationTerm
UCtxtZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
unCSZsyntax.ReactionList
unEBZsyntax.Labelled.Formula
UnrestrZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
unRLZsyntax.ReactionList
unRuleOtter.Rule, Otter
unSAZsyntax.Formula, Zsyntax
withMaybeNeutralZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
withNeutralZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
withOpaqueZsyntax.Labelled.Formula
ZetaXiZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
_activesOtter.Internal.Search
_cscCtxtZsyntax.ReactionList
_cscTypeZsyntax.ReactionList
_gnsConclZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
_gnsLCZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
_gnsUCZsyntax.Labelled.Rule.Frontier, Zsyntax.Labelled.Rule
_inactivesOtter.Internal.Search
_indexOtter.Internal.Search
_isGoalOtter.Internal.Search
_payloadZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule
_rulesOtter.Internal.Search
_scOnOnlyFirstZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
_scRestFirstZsyntax.Labelled.Rule.Interface, Zsyntax.Labelled.Rule
_sqConclZsyntax.Formula, Zsyntax
_sqLCZsyntax.Formula, Zsyntax
_sqUCZsyntax.Formula, Zsyntax
_termZsyntax.Labelled.Rule.BipoleRelation, Zsyntax.Labelled.Rule