Biobase.Infernal.VerboseHit.Import

Enumeratee that transforms a stream of ByteStrings into a stream of VerboseHits.

Documentation

eeToVerboseHit :: MonadIO m => Enumeratee ByteString VerboseHit m b

Stateful reading of VerboseHits. This pipe groups certain lines and condenses them to one hit. As multiple hits share certain state (cm, scaffold, and strand), we thread some state through using goS internally.

TODO is MonadIO really necessary?