BiobaseInfernal-0.7.0.0: Infernal data structures and tools
Biobase.SElab.Taxonomy.Import
Description
Iteratee-based importer. Provides a simple fromFile function that produces both maps in one pass.
parse :: Monad m => Sink ByteString m (Map (Identification Species) Taxonomy, Map (Accession Species) Taxonomy)Source
mkTaxonomy :: Parser TaxonomySource
mapIdTaxonomy :: Monad m => GSink Taxonomy m (Map (Identification Species) Taxonomy)Source
mapAcTaxonomy :: Monad m => GSink Taxonomy m (Map (Accession Species) Taxonomy)Source
fromFile :: String -> IO (Map (Identification Species) Taxonomy, Map (Accession Species) Taxonomy)Source