name: CMCompare version: 0.0.1.2 author: Christian Hoener zu Siederdissen, Ivo L. Hofacker maintainer: choener@tbi.univie.ac.at copyright: Christian Hoener zu Siederdissen, Ivo L. Hofacker, 2010 homepage: http://www.tbi.univie.ac.at/software/cmcompare/ category: Bioinformatics synopsis: Infernal covariance model comparison license: GPL-3 license-file: LICENSE build-type: Simple stability: experimental cabal-version: >= 1.4.0 description: Compares two Infernal covariance models. Returns the common MaxiMin score and the offending RNA sequence. High scores point toward low discriminative power of the two models. Based on: "Discriminatory Power or RNA Family Models, Hoener zu Siederdissen and Hofacker, 2010, accepted for eccb10" extra-source-files: scripts/HighScoreEdges.sh scripts/NeighborGraph.sh executable hsCMCompare build-depends: base >= 4 && < 5, cmdargs == 0.6.4, array, Biobase >= 0.1.0 && < 0.2.0, HsTools >= 0.0.1.1 && < 0.0.2 main-is: CMCompare.hs ghc-options: -O2