Bio.HTS

type HeaderState

runBam

readBam

writeBam

openBamFile

closeBamFile

readBamHeader

showBamHeader

data SortOrder

getSortOrder

bamRead1

getChrId

getChr

position

endPos

queryLen

isRev

flag

mapq

getSeq

qName

quality

cigar

mateChrId

mateChr

matePos

tLen

bamToSam