Resolving dependencies...
Configuring OneTuple-0.2.1...
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Building OneTuple-0.2.1...
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Configuring bytestring-lexing-0.5.0.2...
Installed base-orphans-0.5.4
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Installed OneTuple-0.2.1
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Configuring cereal-0.5.4.0...
Installed base-compat-0.9.1
Configuring dlist-0.8.0.2...
Installed bytestring-lexing-0.5.0.2
Building cereal-0.5.4.0...
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Configuring cmdargs-0.10.14...
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Configuring file-embed-0.0.10...
Installed cereal-0.5.4.0
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Installed file-embed-0.0.10
Configuring fgl-5.5.3.0...
Building fgl-5.5.3.0...
Configuring mtl-2.2.1...
Installed fgl-5.5.3.0
Downloading fgl-extras-decompositions-0.1.1.0...
Building mtl-2.2.1...
Configuring prelude-extras-0.4.0.3...
Installed cmdargs-0.10.14
Configuring parallel-3.2.1.0...
Installed mtl-2.2.1
Building prelude-extras-0.4.0.3...
Building parallel-3.2.1.0...
Configuring primitive-0.6.1.0...
Installed parallel-3.2.1.0
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Configuring reflection-2.1.2...
Installed prelude-extras-0.4.0.3
Building reflection-2.1.2...
Configuring random-1.1...
Installed primitive-0.6.1.0
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Configuring safe-0.3.10...
Installed reflection-2.1.2
Building safe-0.3.10...
Configuring split-0.2.3.1...
Installed random-1.1
Building split-0.2.3.1...
Configuring semigroups-0.18.2...
Installed safe-0.3.10
Building semigroups-0.18.2...
Configuring stm-2.4.4.1...
Installed split-0.2.3.1
Building stm-2.4.4.1...
Configuring strict-0.3.2...
Installed semigroups-0.18.2
Building strict-0.3.2...
Configuring syb-0.6...
Installed strict-0.3.2
Configuring th-lift-0.7.6...
Installed stm-2.4.4.1
Building syb-0.6...
Building th-lift-0.7.6...
Configuring time-locale-compat-0.1.1.3...
Installed th-lift-0.7.6
Building time-locale-compat-0.1.1.3...
Configuring text-1.2.2.1...
Installed syb-0.6
Building text-1.2.2.1...
Configuring transformers-compat-0.5.1.4...
Installed time-locale-compat-0.1.1.3
Building transformers-compat-0.5.1.4...
Configuring ViennaRNA-bindings-0.1.2.2...
Installed transformers-compat-0.5.1.4
Building ViennaRNA-bindings-0.1.2.2...
Installed ViennaRNA-bindings-0.1.2.2
Configuring tuple-0.3.0.2...
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Installed text-1.2.2.1
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Configuring logict-0.6.0.2...
Installed fgl-extras-decompositions-0.1.1.0
Building logict-0.6.0.2...
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Installed logict-0.6.0.2
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Configuring tf-random-0.5...
Installed monad-primitive-0.1
Building tf-random-0.5...
Configuring StateVar-1.1.0.4...
Installed tf-random-0.5
Building StateVar-1.1.0.4...
Configuring vector-0.11.0.0...
Installed tuple-0.3.0.2
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Configuring th-expand-syns-0.4.1.0...
Installed StateVar-1.1.0.4
Building th-expand-syns-0.4.1.0...
Configuring exceptions-0.8.3...
Installed th-expand-syns-0.4.1.0
Building exceptions-0.8.3...
Configuring mmorph-1.0.9...
Installed exceptions-0.8.3
Building mmorph-1.0.9...
Configuring tagged-0.8.5...
Installed mmorph-1.0.9
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Configuring transformers-base-0.4.4...
Installed tagged-0.8.5
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Installed transformers-base-0.4.4
Configuring hashable-1.2.4.0...
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Configuring parsec-3.1.11...
Installed hashable-1.2.4.0
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Configuring smallcheck-1.1.1...
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Building smallcheck-1.1.1...
Configuring QuickCheck-2.8.2...
Installed parsec-3.1.11
Building QuickCheck-2.8.2...
Configuring th-reify-many-0.1.6...
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Configuring pipes-4.2.0...
Installed th-reify-many-0.1.6
Building pipes-4.2.0...
Configuring distributive-0.5.0.2...
Installed pipes-4.2.0
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Configuring monad-control-1.0.1.0...
Installed distributive-0.5.0.2
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Installed QuickCheck-2.8.2
Configuring unordered-containers-0.2.7.1...
Building unordered-containers-0.2.7.1...
Installed monad-control-1.0.1.0
Configuring void-0.7.1...
Building void-0.7.1...
Configuring cereal-vector-0.2.0.1...
Installed void-0.7.1
Building cereal-vector-0.2.0.1...
Configuring scientific-0.3.4.9...
Installed cereal-vector-0.2.0.1
Building scientific-0.3.4.9...
Configuring mwc-random-0.13.5.0...
Installed unordered-containers-0.2.7.1
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Installed scientific-0.3.4.9
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Installed mwc-random-0.13.5.0
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Configuring vector-th-unbox-0.2.1.6...
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Installed vector-th-unbox-0.2.1.6
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Configuring csv-0.1.2...
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Configuring repa-3.4.1.2...
Installed vector-algorithms-0.7.0.1
Installed csv-0.1.2
Configuring lifted-base-0.2.3.8...
Building repa-3.4.1.2...
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Configuring contravariant-1.4...
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Configuring bytes-0.15.2...
Installed contravariant-1.4
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Configuring attoparsec-0.13.1.0...
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Configuring mwc-random-monad-0.7.3.1...
Installed repa-3.4.1.2
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Configuring th-orphans-0.13.3...
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Configuring conduit-1.2.8...
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Downloading BiobaseXNA-0.8.3.0...
Configuring BiobaseXNA-0.8.3.0...
Building BiobaseXNA-0.8.3.0...
Failed to install BiobaseXNA-0.8.3.0
Build log ( /home/builder/.cabal/logs/BiobaseXNA-0.8.3.0.log ):
cabal: Entering directory '/tmp/cabal-tmp-30886/BiobaseXNA-0.8.3.0'
Configuring BiobaseXNA-0.8.3.0...
Building BiobaseXNA-0.8.3.0...
Preprocessing library BiobaseXNA-0.8.3.0...

Biobase/Primary.hs:4:14: warning:
    -XOverlappingInstances is deprecated: instead use per-instance pragmas OVERLAPPING/OVERLAPPABLE/OVERLAPS

Biobase/Secondary.hs:8:14: warning:
    -XOverlappingInstances is deprecated: instead use per-instance pragmas OVERLAPPING/OVERLAPPABLE/OVERLAPS
[ 1 of 11] Compiling Biobase.Primary.IUPAC ( Biobase/Primary/IUPAC.hs, dist/build/Biobase/Primary/IUPAC.o )
[ 2 of 11] Compiling Biobase.Primary.Bounds ( Biobase/Primary/Bounds.hs, dist/build/Biobase/Primary/Bounds.o )
[ 3 of 11] Compiling Biobase.Primary  ( Biobase/Primary.hs, dist/build/Biobase/Primary.o )

Biobase/Primary.hs:38:1: error:
    Failed to load interface for ‘Data.Array.Repa.ExtShape’
    Perhaps you meant
      Data.Array.Repa.Shape (from repa-3.4.1.2)
      Data.Array.Repa.Base
      Data.Array.Repa.Eval (from repa-3.4.1.2)
    Use -v to see a list of the files searched for.
cabal: Leaving directory '/tmp/cabal-tmp-30886/BiobaseXNA-0.8.3.0'
Configuring ADPfusion-0.5.2.0...
Building ADPfusion-0.5.2.0...
Installed lens-4.15.1
Installed ADPfusion-0.5.2.0
cabal: Error: some packages failed to install:
BiobaseTurner-0.3.1.1 depends on BiobaseXNA-0.8.3.0 which failed to install.
BiobaseVienna-0.3.0.0 depends on BiobaseXNA-0.8.3.0 which failed to install.
BiobaseXNA-0.8.3.0 failed during the building phase. The exception was:
ExitFailure 1
RNAFold-1.99.3.4 depends on BiobaseXNA-0.8.3.0 which failed to install.
RNAdesign-0.1.2.1 depends on BiobaseXNA-0.8.3.0 which failed to install.